Query= MSMg01no313_c07.b1 MSMg01no313_c07.b1 CHROMAT_FILE:
MSMg01no313_c07.b1 PHD_FILE: MSMg01no313_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:30 2005
(422 letters)
>mm_chr18_77432762_77433584
Length = 823
Score = 659 bits (341), Expect = 0.0
Identities = 382/399 (95%), Gaps = 7/399 (1%)
Strand = Plus / Minus
Query: 18 gaattcatcccacaagattttatttttaaggcaaagacagtatgggaaagatactgcatg 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaattcatcccacaagattttatttttaaggcaaagacagtatgggaaagatactgcatg 337
Query: 78 ccaagatcatcctaactaa----cccaatagcaaaatctcgcgtggcgtgacgcgtgaaa 133
||||||||||||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 336 ccaagatcatcctaactaaaaat---aatagcaaaatctcgcgtggtgtgacgcatgaaa 280
Query: 134 agctaggcttgtgcctaagaccgtgcactgagtgtcttttaggagaatcttttgggaagc 193
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||
Sbjct: 279 agctaggcttgtgcctaagaccgtgcacggagcgtcttttaggagaatcttttggggagc 220
Query: 194 acttttatgagactgggtgtttttgtacagcttgagcttgcttcaaacccaaaatccttt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acttttatgagactgggtgtttttgtacagcttgagcttgcttcaaacccaaaatccttt 160
Query: 254 gtcttagcttcctgagtaccgggatcacaggtgtccactagtgagaccagttgtgtgaat 313
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gtcttagcttcctgagtactgggatcacaggtgtccactagtgagaccagttgtgtgaat 100
Query: 314 atgatttaccacactaaagggtaagaaatgcaatatttttgaaaacaggactgtgtaatt 373
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 99 atgatttaccacactaaatggtaagaaatgcaatattttttaaaacaggactgtgtaaac 40
Query: 374 atagtctatgagtgcacgaaactttcttatctgcttgaa 412
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atagtctatgagtgcacgaaactttcttatctgcttgaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 823
Length adjustment: 9
Effective length of query: 413
Effective length of database: 814
Effective search space: 336182
Effective search space used: 336182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_c07.g1 MSMg01no313_c07.g1 CHROMAT_FILE:
MSMg01no313_c07.g1 PHD_FILE: MSMg01no313_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:30 2005
(378 letters)
>mm_chr18_77368734_77369511
Length = 778
Score = 543 bits (281), Expect = e-159
Identities = 338/377 (89%), Gaps = 33/377 (8%)
Strand = Plus / Plus
Query: 1 taaactttttgtcttttccatgtagatattaagtgttaagggttttttgtattcccttat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 234 taaactttttgtcttttccatgtagatattaagtgttaagggttttttgtattcttttat 293
Query: 61 ttgtttcttggtttttttgtttgtttgtttgtttgtttgtttttttgttttgttttgttt 120
||||||| |||||||| |||| ||||||||
Sbjct: 294 ttgtttc-----------------------------ttgttttt---tttt-ttttgttt 320
Query: 121 ttttcccaagacatggtttccctgtgtaccagctctggctgtcctggaacatgctttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcccaagacatggtttccctgtgtaccagctctggctgtcctggaacatgctttgtg 380
Query: 181 gaccagcttggcctcgagctcacagagatctgcctgtggttgccttccaagtgctggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaccagcttggcctcgagctcacagagatctgcctgtggttgccttccaagtgctggtgt 440
Query: 241 taaaggccagcaccactgcacctggcttgtttttttggtattctttaaatggttctgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaggccagcaccactgcacctggcttgtttttttggtattctttaaatggttctgaag 500
Query: 301 aatgaatgtacaaaattgttatatattattacaaaaccttagtctcagaaaactatcgtc 360
||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||
Sbjct: 501 aatgaatgtacaaaattgttatataagagtacaaaaccttaggctcagaaaactatcgtc 560
Query: 361 attgatgttgtgaaata 377
|||||||||||||||||
Sbjct: 561 attgatgttgtgaaata 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
