Query= MSMg01no313_g12.b1 MSMg01no313_g12.b1 CHROMAT_FILE:
MSMg01no313_g12.b1 PHD_FILE: MSMg01no313_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:03 2005
(668 letters)
>mm_chr18_49828138_49829205
Length = 1068
Score = 1187 bits (614), Expect = 0.0
Identities = 635/642 (98%)
Strand = Plus / Plus
Query: 1 tttgattggattatttggtttattgatgtctactttcttgagttccctatatattttgga 60
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 201 tttgattggattatttggtttattgatgtctagtttcttgagttctttatatattttgga 260
Query: 61 ttttagccttctgtcagatgtggatttggtggaaatcttttcctgctctgtaggtgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttagccttctgtcagatgtggatttggtggaaatcttttcctgctctgtaggtgtttg 320
Query: 121 ccaggaagcattcacgaaccccaaaagaccaccaaggagccattttcaatgtaatcacat 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 321 ccaggaagcattcacgaaccccaaaagaccaccaaggagccatttccaatgtaataacat 380
Query: 181 taagatctctttattacaaacttgagtttgggcctactcatcaccaacccacaggaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagatctctttattacaaacttgagtttgggcctactcatcaccaacccacaggaccct 440
Query: 241 gaactctcattgagacaaggctttatagggaatgggagcaaatgagggggtgtccatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaactctcattgagacaaggctttatagggaatgggagcaaatgagggggtgtccatcct 500
Query: 301 ggcaagcacctaattgaatgacttttataagccaacaggtgaaccaagaccatatataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 ggcaagcacctaattgaatgacttttataagccaacaggtgaaccaagaccatatgtaat 560
Query: 361 cacaaacggtctgagagtatatctgaaacaatcagattaatctttgattgactattgtta 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacaaacagtctgagagtatatctgaaacaatcagattaatctttgattgactattgtta 620
Query: 421 ggaagtagctagggagtaagtagctctgggatatgggccaagggcaagccaaggggttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaagtagctagggagtaagtagctctgggatatgggccaagggcaagccaaggggttct 680
Query: 481 tcctggatcttgggtgctgcttgggttcagctgcaggtcaagttctcaagcttttttttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcctggatcttgggtgctgcttgggttcagctgcaggtcaagttctcaagcttttttttc 740
Query: 541 tttcaagatggaagcgggacccaagatggagtaagtttggcctttcataggctgctactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttcaagatggaagcgggacccaagatggagtaagtttggcctttcataggctgctactt 800
Query: 601 tgtccgattaatggagtcctttgctgtacagaaatttttcag 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtccgattaatggagtcctttgctgtacagaaatttttcag 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_g12.g1 MSMg01no313_g12.g1 CHROMAT_FILE:
MSMg01no313_g12.g1 PHD_FILE: MSMg01no313_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:04 2005
(383 letters)
>mm_chr18_49992434_49993220
Length = 787
Score = 690 bits (357), Expect = 0.0
Identities = 375/383 (97%), Gaps = 4/383 (1%)
Strand = Plus / Minus
Query: 1 cacattccaggcctatgcagcgggaaaatcatcgctgatcccccgaacccccccgtcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 583 cacattccaggcctatgcagcgggaaaatcatcgctgatcccccgaaccccaaagtcgtg 524
Query: 61 attcttctaacattttggaggaactactttggccagaaga----agtcaaacatcttctt 116
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 523 attcttctaacattttggaggaactactttggccagaagaagtcagtcaaacattttctt 464
Query: 117 tctttctttttaagccccaaaccgcgctgcctggagcggaggccgtgcggcctctcccgc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tctttctttttaagccccaaaccgcgctgcctggagcggaggccgtgcggcctctcccgc 404
Query: 177 gctcaccgtgaagcgctgctcgccgacgctgcccacggcgaagcagtggtcgccggggtt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gctcaccgtgaagcgctgctcgccgacgctgcccacggcgaagcagtggtcgccggggtt 344
Query: 237 caccgcgccggtcagcacctggtgcaggttcatggcggcgtcctagtcccgcagcagccg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 caccgcgccggtcagcacctggtgcaggttcatggcggcgtcctagtcccgcagcagccg 284
Query: 297 ccgccgcggccagctcatgcccgtgctcagccgtctccctgcgccttccccctaggggcg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ccgccgcggccagctcatgcccgtgctcagccgtctccctgcgccttccccctaggggcg 224
Query: 357 gcggccgctcctccgcggcggtg 379
|||||||||||||||||||||||
Sbjct: 223 gcggccgctcctccgcggcggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 787
Length adjustment: 9
Effective length of query: 374
Effective length of database: 778
Effective search space: 290972
Effective search space used: 290972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
