Query= MSMg01no313_k22.b1 MSMg01no313_k22.b1 CHROMAT_FILE:
MSMg01no313_k22.b1 PHD_FILE: MSMg01no313_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:40 2005
(385 letters)
>mm_chr18_31721597_31722381
Length = 785
Score = 696 bits (360), Expect = 0.0
Identities = 378/384 (98%)
Strand = Plus / Plus
Query: 1 ggcacaaatccttcctttggcagctgtcaggaagactctctgcttttagagtatcctgat 60
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 201 ggcacaaattcttcctttggcagctgtcaggaagagtctctgcttttagagtatcatgat 260
Query: 61 ggccaaagaatctacttgatcctaaagggtgtcaaaattatctgaaatttccttaaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccaaagaatctacttgatcctaaagggtgtcaaaattatctgaaatttccttaaggtt 320
Query: 121 ttctgagaagtggagacacaaagaggtaaaataatttaaaaaataaaaactgctgagtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgagaagtggagacacaaagaggtaaaataatttaaaaaataaaaactgctgagtcc 380
Query: 181 agccatttctgtctggagtcctaaaagcatgctcagagtggtaagaagccacctgagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccatttctgtctggagtcctaaaagcatgctcagagtggtaagaagccacctgagtca 440
Query: 241 gacatcccattagctggacaaaaggcattggtctctaagaaaaactggttagatatagag 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 441 gacatcccattagctggacaaaaggcattggtctcaaagaaaaactggttagacatagag 500
Query: 301 gggaaggtagagctaacagttggcagcatagttgggtgtgaattaggagggatggttgag 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gggaaggtagagctaacagttggcagcagagttgggtgtgaattaggagggatggttgag 560
Query: 361 tatttgcctatagcaaggaactta 384
||||||||||||||||||||||||
Sbjct: 561 tatttgcctatagcaaggaactta 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_k22.g1 MSMg01no313_k22.g1 CHROMAT_FILE:
MSMg01no313_k22.g1 PHD_FILE: MSMg01no313_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:40 2005
(200 letters)
>mm_chr18_31824236_31824831
Length = 596
Score = 331 bits (171), Expect = 2e-95
Identities = 191/201 (95%), Gaps = 8/201 (3%)
Strand = Plus / Minus
Query: 2 ataaaacctgcctcttcttacc--ctcccagcatcatcattttggatggggttcctaggc 59
|||||||||||||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 396 ataaaacctgcctcttct--ccctctcccatcatcatcattttggatggggttcctaggc 339
Query: 60 tcctgctgcagctttcccagtgctgccattaccaccttcaactcattcccactcttaaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tcctgctgcagctttcccagtgctgccattaccaccttcaactcattcccactcttaaga 279
Query: 120 agggaggcaggcagcgacagcacacacacatgtacaatcccagcatgtggagaggaaggc 179
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 278 agggaggcaggcagcgacag----cacacatgtacaatcctagcatgtggagaggaaggc 223
Query: 180 gttaagatcaggagttcaaac 200
|||||||||||||||||||||
Sbjct: 222 gttaagatcaggagttcaaac 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 596
Length adjustment: 8
Effective length of query: 192
Effective length of database: 588
Effective search space: 112896
Effective search space used: 112896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
