Query= MSMg01no315_p02.b1 MSMg01no315_p02.b1 CHROMAT_FILE:
MSMg01no315_p02.b1 PHD_FILE: MSMg01no315_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:34 2005
(576 letters)
>mm_chr18_28838001_28838975
Length = 975
Score = 1013 bits (524), Expect = 0.0
Identities = 560/572 (97%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcatttatcctctttgttctcttccataagtgcatggtagcatggaagatcgg 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattcttcatttatcttctttgttctcttccataagtgcatggtagcatggaaaatcgg 264
Query: 65 agggaatctcaggtctaacatctgacttttctataatatgagaaatacttaacttttttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agggaatctcaggtctaacatctgacttttctataatatgagaaatacttaacttttttg 324
Query: 125 gttctttttcctagtctgtgaaatagtttattccaggaaagctttttcacttgaaagact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttctttttcctagtctgtgaaatagtttattccaggaaagctttttcacttgaaagact 384
Query: 185 atgactttgacaaagactatgacagtggtgccatcactgctactaacgcagcttttccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgactttgacaaagactatgacagtggtgccatcactgctactaacgcagcttttccaa 444
Query: 245 tcccttgaaatatttcctgtctcacaaactaacagtgtacggtgggctcctttttagtta 304
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 tcccttgaaatattttctgtctcacaaactaacagtgtacgttgggctcctttttagtta 504
Query: 305 aggctgtgtgttatgtagatggaacgaggagatgcccagatagctggtaaaacctttctg 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 aggctgtgtgttatgtagatggaactaggagatgcccagatagctggtaaaacctttctg 564
Query: 365 tatatgtccacaacagtgtaagaaagataggattttgaattaattaggtttacttttaac 424
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatatgtccataagagtgtaagaaagataggattttgaattaattaggtttacttttaac 624
Query: 425 caatttggatgagagtcgcatagcttatcaactaaggccaaaacagagataaaggagatg 484
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 caatttggatgagagtcacatagcttatcaactaaggccaaaacagagataaaggaaatg 684
Query: 485 aagtctctcttgagttgcctctgttccttcttttccttctccatccttcttccatcttta 544
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 685 aagtctctct-gagttgcctctgttccttcttttccttttccatccttcttccatcttta 743
Query: 545 cctccttttctccaccctgccccatccctatc 576
||||||||||||| ||||||||||||||||||
Sbjct: 744 cctccttttctcccccctgccccatccctatc 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 975
Length adjustment: 10
Effective length of query: 566
Effective length of database: 965
Effective search space: 546190
Effective search space used: 546190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_p02.g1 MSMg01no315_p02.g1 CHROMAT_FILE:
MSMg01no315_p02.g1 PHD_FILE: MSMg01no315_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:34 2005
(337 letters)
>mm_chr18_29010799_29011538
Length = 740
Score = 603 bits (312), Expect = e-177
Identities = 332/340 (97%), Gaps = 3/340 (0%)
Strand = Plus / Minus
Query: 1 tgagtgaaccccctggaaacttttaaaaagatttaaaaaagtatttcagaaagaaaatac 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 540 tgagtgaaccccctggaaacttttaaaaagattaaaaaaagtatttcagaaagaaaatac 481
Query: 61 actttttgtgttgaaatggaataattcaatcacaaaaaactcctgttctttgacaggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 480 actttttgtgttgaaatggaataattcaatcacaaaaaactcctgttctctgacaggtca 421
Query: 121 atttgatttgcccctcagcctgacagtggggacatgaatgaagagcacacatttccttca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 420 atttgatttgcccctcagcctgacagtggggacatgaatgaagaacacacatttccttca 361
Query: 181 gagcaccccaagcttgaaacaccccacacttggctgtactttattatcactgaaagaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gagcaccccaagcttgaaacaccccacacttggctgtactttattatcactgaaagaatt 301
Query: 241 ggaccaacttggggg---aaaaaaaaacgttggcaactgtacagtgttcttaggagaaaa 297
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 300 ggaccaacttgggggaaaaaaaaaaaacattggcaactgtacagtgttcttaggagaaaa 241
Query: 298 aagtatccctatgtatttgctctgggagtattttatgcaa 337
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 240 aagtatccctatgtatttgctcttggagtattttatgcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 740
Length adjustment: 9
Effective length of query: 328
Effective length of database: 731
Effective search space: 239768
Effective search space used: 239768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
