Query= MSMg01no316_i19.b1 MSMg01no316_i19.b1 CHROMAT_FILE:
MSMg01no316_i19.b1 PHD_FILE: MSMg01no316_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:19 2005
(554 letters)
>mm_chr18_11311626_11312579
Length = 954
Score = 920 bits (476), Expect = 0.0
Identities = 534/554 (96%), Gaps = 4/554 (0%)
Strand = Plus / Minus
Query: 3 ggaattcttggt--gtttctcacacaccatgtctcctttcaatcatagaaagcagacctt 60
|||||||||||| |||| | ||||||||||||||||||||||||||||||||||||| |
Sbjct: 754 ggaattcttggtgggttt-t-acacaccatgtctcctttcaatcatagaaagcagaccgt 697
Query: 61 ccatggtgtcacgatagagcatctattcagggaaggtctgttccctccccggcagtgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 696 ccatggtgtcacgatagagcatctattcagggaaggtctgttccctccctggcagtgtgc 637
Query: 121 tctgcttacatagtggaggataagagtgggcaagtctagggagacttttctttttctgag 180
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 636 tctgcttacgtagtggaggataagagtgggcaagtctaaggagacttttctttttctgag 577
Query: 181 ttttacttatgcgctatctctatagaacttgttttaaaaagctgttcatattagaccaag 240
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttttacttatgtgctatctctgtagaacttgttttaaaaagctgttcatattagaccaag 517
Query: 241 catcaatttctggaggcttccatttctagatatttctcatagttagagcactgtccctgt 300
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 516 catcaatttctgaaggcttccatttctagatatttctcagagttagagcactgtccctgt 457
Query: 301 atcattcattgggtttatttattgtattcattccattctattagcttcctgcaatgagtt 360
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atcatttgttgggtttatttattgtattcattccattctattagcttcctgcaatgagtt 397
Query: 361 gaatattgcgccccctccagaactcaaacagaaacaagacccctgaggtaacagtaggaa 420
|||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaatattgtggctcctccagaactcaaacagaaacaagacccctgaggtaacagtaggaa 337
Query: 421 gagtaagaggaaaggctccggtgacatggctggactgatgtggctgggctggcgtgtctc 480
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 336 gaggaagaggaaaggctccggtgacatggctggactgatgtggctgggctggtgtgtctc 277
Query: 481 cactgatgtggctggtctgatgtgactggactgacagtggctctgctgaattggctggac 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 276 cactgatgtggctggtctgatgtgactggactgacagtggctctgctgaagtggctggac 217
Query: 541 tggctccttatgta 554
||||||||||||||
Sbjct: 216 tggctccttatgta 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_i19.g1 MSMg01no316_i19.g1 CHROMAT_FILE:
MSMg01no316_i19.g1 PHD_FILE: MSMg01no316_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:19 2005
(281 letters)
>mm_chr18_11086753_11087433
Length = 681
Score = 455 bits (235), Expect = e-132
Identities = 271/283 (95%), Gaps = 8/283 (2%)
Strand = Plus / Plus
Query: 1 taggaaccatggaataaatgacaagaggcagagaaaagggtcaaggctccttgcagtatg 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 taggaaccatggaataaatgacaagaggcagagaaaagggtcaaggctttttgcagtatg 260
Query: 61 tttttttagcacaattagtagtgctcatctgggcctttaaatgatgctgtcttattgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttttagcacaattagtagtgctcatctgggcctttaaatgatgctgtcttattgtga 320
Query: 121 ctcgacagaacagaagtccctaacttccaaatgtacaggtttaccatgattttctaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcgacagaacagaagtccctaacttccaaatgtacaggtttaccatgattttctaaagc 380
Query: 181 cagactgacacagtctttttttctttcttctcttctcttctcttctcttctcttc-tctt 239
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 381 cagactgacacagtctttctttcttttttctcttctcttctcttctcttctcttcctctt 440
Query: 240 c-tcttc-tcttc-tcttc-tcttc-tcttc-tcttc-tcttc 275
| ||||| ||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 441 cctcttcctcttcctcttcctcttcctcttcctcttcctcttc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
