NAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCAGGACATCCCAGTCTGACAGACTGTCTTGAAAGACTCTC
CCAACCCCTAAGTTATTTCTGTTATGCCCGAGAAATTAAGGGATATTGGG
TTTATTTTCTCACAAAACAGNAAAACTTTTAGTTCCTTAGAGCTTAACTG
TCACATCCTGTACTTTAGATCAGGTATAAAGAATCTACAAACGTCATTGA
TATTCTCCACCATACCTATACCTCTTAACCGGGTTGTCTGAGTAACCACT
AACCCCCCCCCCCGACATGTCTTTTTTTTTCCATCCACCCTCACTGATTG
CCCAGCCCTGATTTTTTTTTATTTTTTCCCCCCCCCCCCCCCCCCTTATA
ATTATATGTTTTTTTTGTTTAATTTTTTTTCCCCCCCCCCCAAAAAAAAA
AAAATACTGTGCGGCGGGGGCCGCCCCCTCTCCTCCCTCCCCCCCCTCCT
CCCTACCCCACCTTCTCCCCCCTCCCCCTCGTCCCCCCCCCTTCCCCTCT
CTCCCCTACCCCTCCCCTCTCTATTTTCCTCTCCTCTCCTCTGTTCCCCC
CTTCTACCCTACCTTCCTCTATCTCCATCCTTGACTTTCCTTTCACCTCT
GTAGCTTCCACCCCCCTTCTTCCCCTTCCCCCTTTCTCGCCCCCCCCTTC
CCTCTCCTGTCCATTTTTTTTACCCCCCCATACTCTACGAACCTTCCCCC
CTCTATTCCCCCTATTTCCCCCTTATTTCCTTTTCGCCCTCCCTCCTCTA
TTTCCGCATCCCTCCCTTCTATTTTCTCTCTCCTC

NCCTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTGCATTCCTTGTATTGCC
TTAATATAATTTTCAAATTTATTTGACTATTTTGTGAATGTGTGTTGGGG
ATGTACATACACGTTGCACTGTGTAGGTAGAGGTCAGAGGCCAACTTCCA
GGATTTTGTTTTTATACTGGCTAGTTTTGTGTCAACTTGACACAGGCTGG
AGTTATCACATAGAAAGGAGATTCAGTTGGGGAAATACCTCTATGAGATC
CAGCTGTAAGGCATTTTCTTAATTAGTGATCAAGGGGGAAAGGCCCCTTG
TGGGTGGTGCCATCTCTGGGCTGGTAGCCTTCGCCTCTATAAGAGACCAG
GCTGAGCAAGCCAGTGGACACAAGCCAGCAAAGAACATCCCTCCATGGCC
TCTGCATCAGCTTCTGCTTCCTAACCTGCTTGAGGTCCAGTCATGACTTC
CTTTGGTGATGAACAGCAATATGGAAGTGTAAGTGGAATAAACCCTTTCC
TCCCCAACTGCTTCTTGGTCATCATGTTTGTGCAGGAATAGAAATCCTGA
CTAAGAGACCTACCATGTGGGTTCATCAGGCTCCTTGGCAAGTGTTTTTA
TTGCTAAGCCACCTTTCTAGTTCCTCTTATTGTCATTTAATCTGGATTTC
CTTGATGATTCTGAGTATTCTATGAGCTTTTN

Query= MSMg01no317_d16.b1 MSMg01no317_d16.b1 CHROMAT_FILE:
MSMg01no317_d16.b1 PHD_FILE: MSMg01no317_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:12 2005
         (164 letters)



>mm_chr18_52859891_52860454
          Length = 564

 Score =  265 bits (137), Expect = 1e-75
 Identities = 154/160 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaggacatcccagtctgacagactgtcttgaaagactctcccaacccctaagtt 64
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaattccaggacagccaagtctgacagactgtcttgaaagactctcccaacccctaagtt 305

                                                                       
Query: 65  atttctgttatgcccgagaaattaagggatattgggtttattttctcacaaaacagnaaa 124
           ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 304 atttctgttatgtttgagaaattaagggatattgggtttattttctcacaaaacagtaaa 245

                                                   
Query: 125 acttttagttccttagagcttaactgtcacatcctgtact 164
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acttttagttccttagagcttaactgtcacatcctgtact 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space:    86736
Effective search space used:    86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no317_d16.g1 MSMg01no317_d16.g1 CHROMAT_FILE:
MSMg01no317_d16.g1 PHD_FILE: MSMg01no317_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:12 2005
         (342 letters)



>mm_chr18_52699317_52700058
          Length = 742

 Score =  646 bits (334), Expect = 0.0
 Identities = 340/342 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataagagaccaggctgagcaagccagtggacacaagccagcaaagaacatccctccatgg 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ataagagaccaggctgagcaagccagtggacacaagccagtaaagaacatccctccatgg 260

                                                                       
Query: 61  cctctgcatcagcttctgcttcctaacctgcttgaggtccagtcatgacttcctttggtg 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctctgcatcagctcctgcttcctaacctgcttgaggtccagtcatgacttcctttggtg 320

                                                                       
Query: 121 atgaacagcaatatggaagtgtaagtggaataaaccctttcctccccaactgcttcttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaacagcaatatggaagtgtaagtggaataaaccctttcctccccaactgcttcttgg 380

                                                                       
Query: 181 tcatcatgtttgtgcaggaatagaaatcctgactaagagacctaccatgtgggttcatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatcatgtttgtgcaggaatagaaatcctgactaagagacctaccatgtgggttcatca 440

                                                                       
Query: 241 ggctccttggcaagtgtttttattgctaagccacctttctagttcctcttattgtcattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctccttggcaagtgtttttattgctaagccacctttctagttcctcttattgtcattt 500

                                                     
Query: 301 aatctggatttccttgatgattctgagtattctatgagcttt 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatctggatttccttgatgattctgagtattctatgagcttt 542


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space:   244089
Effective search space used:   244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)