Query= MSMg01no317_j14.b1 MSMg01no317_j14.b1 CHROMAT_FILE:
MSMg01no317_j14.b1 PHD_FILE: MSMg01no317_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:37 2005
(298 letters)
>mm_chr18_80592489_80593186
Length = 698
Score = 530 bits (274), Expect = e-155
Identities = 292/298 (97%)
Strand = Plus / Minus
Query: 1 agccctaggagtggagtgttcaaggcaaagctgagaggctcagtgtaccttggcctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agccctaggagtggagtgttcaaggcaaagctgagaggctcagtgtaccttggcctccac 439
Query: 61 agatatcttccctcagatgtcagtctgtgctttaagaagggagagtttagttacaggaca 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agatattttccctcagatgtcagtctgtgctttaagaagggagagtttagttacaggaca 379
Query: 121 cggcttctcaaacccgtacaggaacacatcatcagtaggtgaggcagaaggtttgtattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cggcttctcaaacccgtacaggaacacatcatcagtaggtgaggcagaaggtttgtattt 319
Query: 181 ccttcaggaggactcagatggcacaagggctcacacagagcatcctgaaggagatggcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ccttcaggaggactcagatggcacaagggctcacacagagcatcctgaaggagatggcac 259
Query: 241 aatgtttctcatagaacctcctgaaggaacaaggtgaggattcttttgtctttgctct 298
|| | || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aagggctcacacagaacctcctgaaggaacaaggtgaggattcttttgtctttgctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_j14.g1 MSMg01no317_j14.g1 CHROMAT_FILE:
MSMg01no317_j14.g1 PHD_FILE: MSMg01no317_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:37 2005
(282 letters)
>mm_chr18_80393333_80394014
Length = 682
Score = 514 bits (266), Expect = e-150
Identities = 278/286 (97%), Gaps = 8/286 (2%)
Strand = Plus / Plus
Query: 1 tcacctagggaggaccttagggaggacggtgcctcagcagacattagagacctgcctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacctagggaggaccttagggaggacggtgcctcagcagacattagagacctgcctgtg 260
Query: 61 cttcccgccaaggaccaacatttacaatggtgctctttttactcttttccttgtttatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcccgccaaggaccaacatttacaatggtgctctttttactcttttccttgtttatcc 320
Query: 121 aggatgcttttaggtaaatcaggcaccgtgtgtctcagcaagcttgggcagcagtggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggatgcttttaggtaaatcaggcaccgtgtgtctcagcaagcttgggcagcagtggaat 380
Query: 181 caagagccaactttaatgcagtcaaaatagttcttgcctcacagcaccctggaaggacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagagccaactttaatgcagtcaaaatagttcttgcctcacagcaccctggaaggacct 440
Query: 241 gtgtttt----cccacgagacttttgagaaatctgattaggttagg 282
||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gtg----gagccccacgagacttttgagaaatctgattaggttagg 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
