Query= MSMg01no324_j02.b1 MSMg01no324_j02.b1 CHROMAT_FILE:
MSMg01no324_j02.b1 PHD_FILE: MSMg01no324_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:55 2005
(326 letters)
>mm_chr18_43705139_43705864
Length = 726
Score = 542 bits (280), Expect = e-158
Identities = 310/320 (96%)
Strand = Plus / Plus
Query: 4 ggaattcttttgaatttcctcctcggacagcaccctactgctgatcgctggtcaagttcc 63
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttgaatttgctcctcagacagcaccctactgctgatcgctggtcaagttcc 263
Query: 64 aacacaaatgatgaattacaaagatgcttggtggcaagttgctaataagtgcctgttaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacacaaatgatgaattacaaagatgcttggtggcaagttgctaataagtgcctgttaga 323
Query: 124 tggatggcttgcctgttagatggatcacacaactcacaaatgccttaagctgcgcacgag 183
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||
Sbjct: 324 tggatggcttgcctgttagatggatcacacaattcacaaatgcctgaagctgcgcatgag 383
Query: 184 aaccttgtgctttggttagcacctatgtcttaggggctggcatacttggaccataatttt 243
| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 384 agccttgtgctttggttagcacctatatcttaggggctggcatacttggactgtaatttt 443
Query: 244 gctctgcaatttactattttgaataaatcatttgaatacgttgcctcccaaactgggata 303
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 gctctgcaatttactattttgaataaatcatttgaatacgttgcctctcaaactgggata 503
Query: 304 ataagaacacttatgtctta 323
||||||||||||||||||||
Sbjct: 504 ataagaacacttatgtctta 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_j02.g1 MSMg01no324_j02.g1 CHROMAT_FILE:
MSMg01no324_j02.g1 PHD_FILE: MSMg01no324_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:55 2005
(433 letters)
>mm_chr18_43869089_43869921
Length = 833
Score = 783 bits (405), Expect = 0.0
Identities = 426/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Minus
Query: 1 tgagttggaagaaaaaagtcaccatgtagggcagtaggtaggggcatagtaaccaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgagttggaagaaaaaagtcaccatgtagggcagtaggtaggggcatagtaaccaaagga 457
Query: 61 gaaaagtgtgaggaattgggggctagcaccttttggtaccttctccttccaatgtaagac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 456 gaaaagtgtgaggaattgggggctagcaccttttggtaccttctccttccaacgtaagac 397
Query: 121 ggcaatgtcaatagagcttcttgagagtcagtttaaaatgccaagcctgaagaagcccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggcaatgtcaatagagcttcttgagagtcagtttaaaatgccaagcctgaagaagcccag 337
Query: 181 caaagcatgagggcaagttatcttcaaaggaaagattagccttgtatgattggaattgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 caaagcatgagggcaagttatcttcaaaggaaagattagccttgtatgattggaattgga 277
Query: 241 gaacgacatctcacatattcactcttctttgatcttgctcttaactcttgacccttacta 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaacaacatctcacatattcactcttctttgatcttgctcttaactcttgacccttacta 217
Query: 301 catttgcctgggtagggtttctgtgagccccatgggcccaggttaggcgactctacaggt 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 216 catttgcctgggtagggtttctgtgagccccatgggcccaggttaggtgactctacaggt 157
Query: 361 cttcttgtggaaaagaacctaaattgtatttagatatgcccttcttgatgtacatagata 420
||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||
Sbjct: 156 cttcttgtggaaaagaatctaaactgtatt-agatatgtccttcttgatgtacatagata 98
Query: 421 atttttatcagtg 433
|||||||||||||
Sbjct: 97 atttttatcagtg 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
