Query= MSMg01no326_o02.b1 MSMg01no326_o02.b1 CHROMAT_FILE:
MSMg01no326_o02.b1 PHD_FILE: MSMg01no326_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:39 2005
(534 letters)
>mm_chr18_34941149_34942082
Length = 934
Score = 961 bits (497), Expect = 0.0
Identities = 527/547 (96%), Gaps = 19/547 (3%)
Strand = Plus / Plus
Query: 6 aatctttttctccc-tttttttttaaaaacattcccactatcccacatgtatgtatccct 64
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aatctttttc-cccatttttttttaaaaacattcccactatcccacatgtatgtatccct 249
Query: 65 ggtgtgcttggaactcattatgtagaccaggttggtgaacttaagtgctggttagtatta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggtgtgcttggaactcattatgtagaccaggttggtgaacttaagtgctggttagtatta 309
Query: 125 aaggcattttccactattcctgctggctttgatcattggatctaccattcacctgatttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aaggcattttccactattcctgctggctttgatcattggatctaccattcacctgatttg 369
Query: 185 tttttattggatatgaaataggcaatctgatctaccctttctttttcctactgactaatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tttttattggatatgaaataggcaatctgatctaccctttctttttcctactgactaatc 429
Query: 245 aattatggcgtcccca---------------ctgttactaactaaactctgttgtggtgc 289
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 430 aattatggcgtccccaattatggcgtccccactgttactaactaaactctgttgtggtgc 489
Query: 290 ggtagggttgaccggtggttttaagtgtggtatttgggtggctctgctgtcatagctgtc 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggtagggttgaccggtggttttaagtgtggtatttgggtggctctgctgtcatagctgtc 549
Query: 350 tcagttcaggagtttcagggaggactaagacattatctgccttaatgtcttaactttttt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcagttcaggagtttcagggaggactaagacattatctgccttaatgtcttaactttttt 609
Query: 410 ttttttttt--cgagacagggtttctctgtgtagccctggctgttctggaactcactttg 467
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttttttttttcgagacagggtttctctgtgtagccctggctgttctggaactcactttg 669
Query: 468 tagaccaggctggcctcaaactcagaaatccgcctgcctctgcctccagagtgctaggat 527
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 670 tagaccaggctggcctcaaactcagaaatccgcctgcctctgcctccggagtgctaggat 729
Query: 528 taaaggt 534
|||||||
Sbjct: 730 taaaggt 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_o02.g1 MSMg01no326_o02.g1 CHROMAT_FILE:
MSMg01no326_o02.g1 PHD_FILE: MSMg01no326_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:39 2005
(311 letters)
>mm_chr18_35026302_35027010
Length = 709
Score = 574 bits (297), Expect = e-168
Identities = 307/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Minus
Query: 1 ctagagggccagcatgttctacctcagatctacatctgtttctccccctttctcatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ctagagggccagcatgttctacctcagatctacatctgtttctccccctttctcatttct 450
Query: 61 tccatgctatatggtcttggtctttttcatatttctgagatgctaaacaatgtccccggg 120
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 449 tccatgc--tatggtcttggtctttttcatatttccgagatgctaaacaatgtccccggg 392
Query: 121 tagcaatcactagttcagcactctttccaaatgtcagtttttactatggtcacagctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tagcaatcactagttcagcactctttccaaatgtcagtttttactatggtcacagctttt 332
Query: 181 atcagcactgttctgagcctttggttgcagctatccctcttaggagcaagagatgaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atcagcactgttctgagcctttggttgcagctatccctcttaggagcaagagatgaaatt 272
Query: 241 aatgctgttgtcattttggttgcttcttctggaacccaggttttgtgcatgttctgaaag 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 271 aatgctgttgtcattttggttgcttcttctggaacccaggctttgtgcatgttctgaaag 212
Query: 301 agccctgttgg 311
|||||||||||
Sbjct: 211 agccctgttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 709
Length adjustment: 9
Effective length of query: 302
Effective length of database: 700
Effective search space: 211400
Effective search space used: 211400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
