Query= MSMg01no327_h18.b1 MSMg01no327_h18.b1 CHROMAT_FILE:
MSMg01no327_h18.b1 PHD_FILE: MSMg01no327_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:24 2005
(366 letters)
>mm_chr18_47508293_47509058
Length = 766
Score = 685 bits (354), Expect = 0.0
Identities = 360/362 (99%)
Strand = Plus / Plus
Query: 5 gaattctaattgcctgctgcaggactatgtggcgctgcctgtgacagcggcaaatgggga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaattgcctgctgcaggactatgtggcgctgcctgtgacagcggcaaatgggga 264
Query: 65 aaataggaaggcattagagaaagtctgttgtgatggagtggaattcctagaatacactgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaataggaaggcattagagaaagtctgttgtgatggagtggaattcctagaatacactgt 324
Query: 125 gctataaaatgagatttggctccacggagctgggagaaaacaatgggctcaatagtaccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctataaaatgagatttggctccacggagctgggagaaaacaatgggctcaatagtaccc 384
Query: 185 ggcactggctgctgggtgtattctagctcctttagtcggggcctttcattcatgggagca 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcactggctgctgggtgtattctagctcctttagtcggggcctttcattcatgggagca 444
Query: 245 ggagccacactagaaaatgaaggggaggagggtgtcttactgctgtggaaatgctgagcg 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggagccacactataaaatgaaggggaggagggtgtcttactgctgtggaaatgctgagcg 504
Query: 305 caggacggcaggaaaaccccaacatacttgcataccagggtcaggacataccactttccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caggacggcaggaaaaccccaacatacttgcataccagggtcaggacataccactttccc 564
Query: 365 ca 366
||
Sbjct: 565 ca 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_h18.g1 MSMg01no327_h18.g1 CHROMAT_FILE:
MSMg01no327_h18.g1 PHD_FILE: MSMg01no327_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:24 2005
(411 letters)
>mm_chr18_47673047_47673857
Length = 811
Score = 748 bits (387), Expect = 0.0
Identities = 405/415 (97%), Gaps = 8/415 (1%)
Strand = Plus / Minus
Query: 1 catgtcaaatgtccttgtctttgcagggcaaaggatggtgaaggcttcacacccattggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 catgtcaaatgtccttgtctttgcagggcaaaggatggtgaaggcttcacacccattggg 374
Query: 61 tcattttaaaagactacttaagaaagaatttagagacaatgagaatccctcagaaggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcattttaaaagactacttaagaaagaatttagagacaatgagaatccctcagaaggaat 314
Query: 121 tcctggaaaagtttctagactcaacttctctgagaagttataagtgtaagatggaaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcctggaaaagtttctagactcaacttctctgagaagttataagtgtaagatggaaatcc 254
Query: 181 atatttattaaaatcagctctattttaaaacagcaataacaagtgctccagaccagcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atatttattaaaatcagctctattttaaaacagcaataacaagtgctccagaccagcagt 194
Query: 241 tctcaaatatacttgtatatcagaatcatctgggaagatgatatttgcacaatttttaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tctcaaatatacttgtatatcagaatcatctgggaagatgatatttgcacaatttttaca 134
Query: 301 ccgtttcgtctaaccttccttctagctgcagggtcaaaagcagcg----ccccgcctatc 356
||||||||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct: 133 ccgtttcgtctaaccttccttctagctgcagggtcaaaagcagtgttgt----gtctatc 78
Query: 357 tgtgtgtgaggtttaagaagggaaaaggttggaagaggagagtagaggaggggtt 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tgtgtgtgaggtttaagaagggaaaaggttggaagaggagagtagaggaggggtt 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
