Query= MSMg01no329_c18.b1 MSMg01no329_c18.b1 CHROMAT_FILE:
MSMg01no329_c18.b1 PHD_FILE: MSMg01no329_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:32 2005
(508 letters)
>mm_chr18_47750323_47751230
Length = 908
Score = 919 bits (475), Expect = 0.0
Identities = 496/503 (98%)
Strand = Plus / Plus
Query: 6 gaattctcaatttttctgctatttttaggcacataggttaagagacaggttgaattcatt 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctcaatttttgtgctatttttaggcacataggttaagagacaggttgaattcatt 265
Query: 66 ttttttactcacatttttaagcattttgtttactaattatatattataagggacaggaaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttttttactcacatttttaagcattttgtttactaattatatattataagggacaggaaa 325
Query: 126 tagactgatgttaagtaataacataatcattggctgagactacaagatggtaaaaaattt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tagactgatgttaagtaataacataatcattggctgagactacaagatggtaaaaaattt 385
Query: 186 ccatataagaatttgtctcctttcttttgcctaattgggtgatggtaaatcaaagttcaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccatataagaatttgtctcctttcttttgcctaattgggtgatggtaaatcaaagttcaa 445
Query: 246 tccgacttcctgtgacaaatctgatgcccgctattcctggttgatcacagagagccatac 305
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 446 tccgacttcctgtgacaaatctgatgcccgctaagcctggttgatcacagagagccatac 505
Query: 306 ttccttgtgataaatgactcagagaccgggagaaggctcaggtacttccaatgaaatttt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttccttgtgataaatgactcagagaccgggagaaggctcaggtacttccaatgaaatttt 565
Query: 366 tcttggcccgcaagaggaaacaagattgcaaatttgagagtggacagtaatgatccgtat 425
||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tcttgtcatggaagaggaaacaagattgcaaatttgagagtggacagtaatgatccgtat 625
Query: 426 tgggatgctatttataatcacaggcacaggaagttaattagtttttattaaggtaactga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgggatgctatttataatcacaggcacaggaagttaattagtttttattaaggtaactga 685
Query: 486 gctgatcccaataggaaaaggtg 508
|||||||||||||||||||||||
Sbjct: 686 gctgatcccaataggaaaaggtg 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_c18.g1 MSMg01no329_c18.g1 CHROMAT_FILE:
MSMg01no329_c18.g1 PHD_FILE: MSMg01no329_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:32 2005
(423 letters)
>mm_chr18_47919678_47920499
Length = 822
Score = 717 bits (371), Expect = 0.0
Identities = 410/423 (96%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 1 tttgggtaccacgaaacacactagaaaaaggtcaggttttcctccaaactagaagtaacg 60
|||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||
Sbjct: 622 tttgggtaccacgaaacacactag-aaaaggtcagattttccttcaaactagaagtaacg 564
Query: 61 agaaatgaaagggtaaaatcagcacatttgctatcaaggcatctaattaaaatgccttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agaaatgaaagggtaaaatcagcacatttgctatcaaggcatctaattaaaatgccttaa 504
Query: 121 ttctatttaactcaatatccaaattatttaatcttttaacaattctctcacggcttttat 180
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||
Sbjct: 503 ttctatttaactcaatattcaaattatttaatcttttaataattctctcacggctcctat 444
Query: 181 ctgccttcctgttcttcctttccctcttcctttgtcttcttgataaatgtcaccgttagg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 443 ctgccttcctgttcttcctttccctcttcctttgtcttcttgataaatgtcatcgttagg 384
Query: 241 tgcacttgcctactattagctaccatttcttcatagttgtgctgtgtttgggcaagaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgcacttgcctactattagctaccatttcttcatagttgtgctgtgtttgggcaagaagg 324
Query: 301 ggccttgcttttatttctcaaatgtttcatttgaaaacttccccaaacccagttctatgc 360
|||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||
Sbjct: 323 ggccttgcttttatttctcaaatgcttcatttgaaaactttcagaaacccagttctaggc 264
Query: 361 agccgatatgctcctcgttttaccctggtatcacgacagagagcatttcagccctagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agccgatatgctcctcgttttaccctggtatcacgacagagagcatttcagccctagcca 204
Query: 421 gtg 423
|||
Sbjct: 203 gtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 822
Length adjustment: 9
Effective length of query: 414
Effective length of database: 813
Effective search space: 336582
Effective search space used: 336582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
