TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTGGGTCATTCCAGATTTTGCCAAAATGTCTTAGGAACTTCATGAC
TTATGTATACTGGTTCTACTGCACTCATATCCAAACAAGTCCAGTACAGA
TAAACTCTATCCAAAAAAAAAAAAATCATTAATTTTTCTTTTTGCTTTTT
CCTTAAAAAAAAAAATAAAAAGAAAAGAAAAGAAACTGAGCAGGAAATCT
CACTTAAACAAGCTGTCTCACGACATTTCTGGCAAACTCTGATTCCAACG
AAGTTGAAAATATCTCAGGAGCAGCCTGTCACACAGAATTTCAGTGCTTC
TTCTCCAAGGAAATGCAGAAATAGACAACATGTGGGATTCCGGGGATTTA
GATCACTTAAGAAAAACCATCATAATGTCGACTTCAGGCTGCCCTGCTTT
AAGCCAGAAGCATATGTCGCCCCCATGCATCGGTTAGCTTCTACTGCGTA
AGAAATCACCCCTCACACACATTTCAGTGGTTTAAGCATCACGATTTTTG
TTATTGTTGCTCAGAACCCGTTTACAGTTTGGGTAGGTAACTGTCTTGTC
TTTATCCGGGCTCAGCTAGGCTCAGCCTAGTGAGTGAACTCTGCTGCCCA
TGATTAAGTGCGTTAGAACATTTGAGGCAATTTATCTCCCCTCCATGCGT
TCATTCACTCTTCATCAGACTAATCTACAACTGACTA

CGAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGGGCTAATATCCATTTA
TCAGTCAGTACATACCATGAGTGTTCTTTTGTGTCTGTGTTACCTCACTC
AGTATGCTATTTTCTAGTTCCATCCGTTTGCCTTCACATTTCATGAAGCC
ATTGTTTTTAGTAGCTGAGTAGTATTTCATTGTGAAAATAACCTTATTAA
AAATCGAGTACAGAGCTAAACAAAGAATTCTCAGCTGAGGAATCCTGAAT
GGCTGAGAAGCAATTAAAGAAATGTTCAACATCCCTAAGGATGTTAGTCC
TTAGTCCTTAGGGAAATGCAAATCAAAACAGTCTTGAGATTCTACCTCAC
ACTAATCAGAATGCCCAAGATCAAAAACTCAGGTGACAGCAGATGCTGGC
AAAGGAGTAAGAGGAACACCTCTCCATTGCTGGTGGGACTGCAAGCTGGT
TAAACCACTTTGGAAATCTATCTGTTAGTTCACCAGAAAATTGGAAATAT
TTCTATCTTAAGACTCATCTATACCACTATTTGTCATATACTCAAAAGAT
GCTTTAATATATAACAAGGACACATGCTCTACTATGTTTATAGCAGCCTT
ACTTATCATAGCTTGAAGCTGACAACAATCCAGATGTTCCTCAACAGAAT
AATGCATACCGAAAAGGTGTTAAATTCACCTTGTGT

Query= MSMg01no329_o10.b1 MSMg01no329_o10.b1 CHROMAT_FILE:
MSMg01no329_o10.b1 PHD_FILE: MSMg01no329_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:31 2005
         (581 letters)



>mm_chr18_26452583_26453563
          Length = 981

 Score = 1054 bits (545), Expect = 0.0
 Identities = 570/579 (98%), Gaps = 3/579 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttgggtcattccagattttgccaaaatgtcttaggaacttcatgacttatgtat 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gaattcttgggtcattccggattttgccaaaatgtcttaggaacttcatgacttatgtat 760

                                                                       
Query: 65  actggttctactgcactcatatccaaacaagtccagtacagataaactctatccaaaaaa 124
           |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 759 actggtcctactgcactcatatccaaacaagtccagtacagataaactctatcc-aaaaa 701

                                                                       
Query: 125 aaaaaaatcattaatttttctttttgctttttccttaaaaaa--aaaaataaaaagaaaa 182
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 700 aaaaaaatcattaatttttctttttgctttttccttaaaaaaataaaaataaaaagaaaa 641

                                                                       
Query: 183 gaaaagaaactgagcaggaaatctcacttaaacaagctgtctcacgacatttctggcaaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gaaaagaaactgagcaggaaatctcacttaaacaagctgtctcacgacatttctggcaaa 581

                                                                       
Query: 243 ctctgattccaacgaagttgaaaatatctcaggagcagcctgtcacacagaatttcagtg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctctgattccaacgaagttgaaaatatctcaggagcagcctgtcacacagaatttcagtg 521

                                                                       
Query: 303 cttcttctccaaggaaatgcagaaatagacaacatgtgggattccggggatttagatcac 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cttcttctccaaggaaatgcagaaatagacaacatgtgggattccggggatttagatcac 461

                                                                       
Query: 363 ttaagaaaaaccatcataatgtcgacttcaggctgccctgctttaagccagaagcatatg 422
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttaagaaaaaacatcataatgtcgacttcaggctgccctgctttaagccagaagcatatg 401

                                                                       
Query: 423 tcgcccccatgcatcggttagcttctactgcgtaagaaatcacccctcacacacatttca 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcgcccccatgcatcggttagcttctactgcgtaagaaatcacccctcacacacatttca 341

                                                                       
Query: 483 gtggtttaagcatcacgatttttgttattgttgctcagaacccgtttacagtttgggtag 542
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 340 gtggtttaagcatcacgatttttgttattgttgctcagaacctgtttacagtttgggtag 281

                                                  
Query: 543 gtaactgtcttgtctttatccgggctcagctaggctcag 581
           |||||||||||||||||||| ||||||||||||| ||||
Sbjct: 280 gtaactgtcttgtctttatctgggctcagctaggttcag 242


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space:   554441
Effective search space used:   554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)