Query= MSMg01no330_b02.b1 MSMg01no330_b02.b1 CHROMAT_FILE:
MSMg01no330_b02.b1 PHD_FILE: MSMg01no330_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:43 2005
(659 letters)
>mm_chr18_71224292_71225349
Length = 1058
Score = 1203 bits (622), Expect = 0.0
Identities = 646/654 (98%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 5 gaattcccttttttttaccaacaggaagaaaatctagacgatagcatagcagatggttta 64
|||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattccc-ttttcttaccaacaggaagaaaatctagatgatagcatagcagatggttta 263
Query: 65 ccacaaagtgttcctgataagtaactcaatgtaaacctccaccatttatattttgagttt 124
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 ccacaaagtgttcccgataagtaacgcaatgtaaacctccaccatttatattttgagttt 323
Query: 125 gaataatatttcccagaagttgaaaacacattttaaaagtatagttccaccaacaatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 gaataatatttcccagaagttgaaaacacattttaaaagtatagttccaccaacattgaa 383
Query: 185 attgattcctattaagttatttgtgaactctctgagagcactatgataaagacacatgag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attgattcctattaagttatttgtgaactctctgagagcactatgataaagacacatgag 443
Query: 245 ggaggcttcaatagactccattggtcaagcagtaattatttgttttgtagataggaaggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggaggcttcaatagactccattggtcaagcagtaattatttgttttgtagataggaaggg 503
Query: 305 ccattgtgacacacaagaccaaaatataagttctaaaggaatccatttgcatttccagta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccattgtgacacacaagaccaaaatataagttctaaaggaatccatttgcatttccagta 563
Query: 365 gagttcactaaagtatcacatgttgttcctcaatttgtccgttaatatttatatggatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagttcactaaagtatcacatgttgttcctcaatttgtccgttaatatttatatggatat 623
Query: 425 tagtttaacactctgcaaattcatagtgcctagtacattctataatgcatttaattgtta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagtttaacactctgcaaattcatagtgcctagtacattctataatgcatttaattgtta 683
Query: 485 aatgtaaataattctgctactctttaatggatgatatgtttggctttgtttcatagtaac 544
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 684 aatgtaaataattctgctactctttaatgggtgatatgtttggctttgtttcatagtaac 743
Query: 545 attaaggctgcatcctgggtaaagcttgaaagcttttttgtcaggaactggacctgcttc 604
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 attaaggctgcatcctggataaagcttgaaagcttttttgtcaggaactggacctgcttc 803
Query: 605 ttgtctctccatgtggcccacataaaattaataagatacagaattggacaacag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ttgtctctccatgtggcccacataaaattaataagatacagaattggacaacag 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1058
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1048
Effective search space: 680152
Effective search space used: 680152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_b02.g1 MSMg01no330_b02.g1 CHROMAT_FILE:
MSMg01no330_b02.g1 PHD_FILE: MSMg01no330_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:43 2005
(587 letters)
>mm_chr18_71330334_71331320
Length = 987
Score = 1035 bits (535), Expect = 0.0
Identities = 577/596 (96%), Gaps = 10/596 (1%)
Strand = Plus / Minus
Query: 1 aagtagctctcatcttacaagcacagttaattatgaacatccaggagagatgattttgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aagtagctctcatcttacaagcacagttaattatgaacatccaggagagatgattttgca 624
Query: 61 acttcagttttatcatcaacttactggtctatcttccaatactctcaaaggacagacaca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 623 acttcagttttatcatcaacttacaggtctatcttccaatactctcaaaggacagacaca 564
Query: 121 tgattgacaccttcagattctccatcttaaggacagggaaggctgcaaaatgagctccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgattgacaccttcagattctccatcttaaggacagggaaggctgcaaaatgagctccta 504
Query: 181 tcaatacataagagaccttgtttgtaatctgaccgtaatgatgaaagaccacatttcatt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcaatacataagagaccttgtgtgtaatctgaccgtaatgatgaaagaccacatttcatt 444
Query: 241 ctggggcggttgaacaaaatgaatatgccttctgtgctacagcccaaaccaacatctgtg 300
||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 443 ctggggcagttaaacaaaatgaatatgccttctgtgctacagcccagaccaacatctgtg 384
Query: 301 tatccgtttagtctgaagcatggtttgctcttaaaaattcaaacagaaaactcacacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 383 tatccgtttagtctgaagcatggtttgctcttaaaaattcaaacagaaagctcacacttt 324
Query: 361 cactaatagagagtatgtgataatgaacattgggaaactgcaatttaatgtgaaattcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cactaatagagagtatgtgataatgaacattgggaaactgcaatttaatgtgaaattcta 264
Query: 421 cttaacagtcatgaaattggcacaaactgaaagtaaacatttcagtcaggcaggaaaaca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 263 cttaacagtcatgaaattggcacaaactgaaagtaaacatttcagtcaggcagggaaaca 204
Query: 481 gga--------gctttaaatactgtgcatccacattagtggnggtctggttatgactgta 532
||| |||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 203 ggaaaacagcagctttaaatactgtgcatccacattagtgggggtctggttatgactata 144
Query: 533 aagtaggcaccatgtttctcggctgctca-aacttactcctcaaaaagtcatctag 587
||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 143 aagtaggcaccatgtttctcggctgctcagaa-ttactcctcaaaaagtcatctag 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
