ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCAGCTGTGTCCTCCTGAATGGCTGAGAAGCAATTAAAGAAATGTTC
AACATCCCTAAGGATGTTAGTCCTTAGTCCTTAGGGAAATGCAAATCAAA
ACAGTCTTGAGATTCTACCTCACACTAATCAGAATGGCTAAGATCAAAAA
CTCAGGTGACAGCAGATGCTGGCAAAGGAGTAAGAGGAACACCTCTCCAT
TGCTGGTGGGACTGCAAGCTGGTTAAACCACTTTGGAAATCTATCTGTTA
GTTCACCAGAAAATTGGAAATATTTCTATCTTAAGACTCATCTATACCAC
TATTTGTCATATACTCAAAAGATGCTTTAATATATAACAAGGACACATGC
TCTACTATGTTTATAGCACCCTTACTTATCATAGCTTGAAGCTGAAAACA
ATCCAGATGTTCCTCAACAGAAAAATGGATACAGAAAAGGTGGTAGATTT
ACATTGTGGAGTAGTACTCAGCTCTCTTGTTTAATTCAGAACCTGACTAT
TGGGTTTTAGGCTGTTACTACTTCATTTGGTACCAGAATACTCATACCCA
GGGTTACAGTTGTACCTCAAGTACTATTTGTTTTTACTATCTTATAGTGG
CTCAGTCACTGGTTAAAAGAGGAAGTCTTGTTTACCTGTGTTTTCTTTAG
CACATTTCTTTCATTGTATTGAAGAAGTAGGAAAA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTAAGTCAGTACTTGTGTCTTTAATTGAC
TTAGAATATTTGGCAATAGGGACACAGAAACAAAAAGTAAATCTTAACTT
CCAATGCCCTGACCAAATATTTGTTCTTCTCCAGTTATTCACTTACCTTC
AAGAGAGCAACAGAAAGTCAGTAACACGGGGCTAAGTGGCAACCTCAGTA
ACAGAACTGCACTGCCAAATCAGCACCCAGAGGCCACTGCTCTGAAAAGG
CACAAAGAAAATGTGTGTTTCATTCATTTGTGCCATAATTTCCACTGTAC
TGGCTTGGAGCAGAGTCCACAGCAAAATGCAAAAGGGACTATAAACCAGA
AAGACACAGCCCTGCTCCTCATAAAACTGCTTAACTACCCAACTAAAAAC
AACAAGAGCAAAAGGCAGCCTAACAATTAGAGGCGAGATGCATCGCAGCA
CATACCCATCTGTGCCATAAGAAGGCAGCAAGTTCAGGGTGGAGTGAGTC
AGCAGCTTTCTGGAAGAGACCAGTTTCCAGCTTGTTCTTAAAAGTAAACA
AATTAGTGAATAAAATGGAGAACTTTTGCTTTTGAAAAGTGTTCTCTCAG
CTTCTTTTTGGGACTTTCAGGGTGGCAGTCATGATAGGTCCCTGTCTGTA
AGGAGGACACAGTCACCAGAGCATTATGAACAGTGTC

Query= MSMg01no331_f03.b1 MSMg01no331_f03.b1 CHROMAT_FILE:
MSMg01no331_f03.b1 PHD_FILE: MSMg01no331_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:12 2005
         (685 letters)



>mm_chr18_26284110_26285194
          Length = 1085

 Score = 1241 bits (642), Expect = 0.0
 Identities = 672/682 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctcagctgtgtcctcctgaatggctgagaagcaattaaagaaatgttcaacatcc 63
           ||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcagctgaggaatcctgaatggctgagaagcaattaaagaaatgttcaacatcc 263

                                                                       
Query: 64  ctaaggatgttagtccttagtccttagggaaatgcaaatcaaaacagtcttgagattcta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctaaggatgttagtccttagtccttagggaaatgcaaatcaaaacagtcttgagattcta 323

                                                                       
Query: 124 cctcacactaatcagaatggctaagatcaaaaactcaggtgacagcagatgctggcaaag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctcacactaatcagaatggctaagatcaaaaactcaggtgacagcagatgctggcaaag 383

                                                                       
Query: 184 gagtaagaggaacacctctccattgctggtgggactgcaagctggttaaaccactttgga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 384 gagtaagaggaacacctctccattgctggtgggactgcaagctggttaaaccaatttgga 443

                                                                       
Query: 244 aatctatctgttagttcaccagaaaattggaaatatttctatcttaagactcatctatac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatctatctgttagttcaccagaaaattggaaatatttctatcttaagactcatctatac 503

                                                                       
Query: 304 cactatttgtcatatactcaaaagatgctttaatatataacaaggacacatgctctacta 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cactatttgtcatatactcaaaagatgctttaatatataacaaggacacatgctctacta 563

                                                                       
Query: 364 tgtttatagcacccttacttatcatagcttgaagctgaaaacaatccagatgttcctcaa 423
           ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 tgtttatagcagccttacttatcatagcctgaagctgaaaacaatccagatgttcctcaa 623

                                                                       
Query: 424 cagaaaaatggatacagaaaaggtggtagatttacattgtggagtagtactcagctctct 483
           ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 624 cagaaaaatggatacagaaaatgtggtagatttacattgtggagtactactcagctctct 683

                                                                       
Query: 484 tgtttaattcagaacctgactattgggttttaggctgttactacttcatttggtaccaga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtttaattcagaacctgactattgggttttaggctgttactacttcatttggtaccaga 743

                                                                       
Query: 544 atactcatacccagggttacagttgtacctcaagtactatttgtttttactatcttatag 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atactcatacccagggttacagttgtacctcaagtactatttgtttttactatcttatag 803

                                                                       
Query: 604 tggctcagtcactggttaaaagaggaagtcttgtttacctgtgttttctttagcacattt 663
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 804 tggctcagtcactggttaaaagaggaagtcttgtttacctgtgttttctttagcgcattt 863

                                 
Query: 664 ctttcattgtattgaagaagta 685
           ||||||||||||||||||||||
Sbjct: 864 ctttcattgtattgaagaagta 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no331_f03.g1 MSMg01no331_f03.g1 CHROMAT_FILE:
MSMg01no331_f03.g1 PHD_FILE: MSMg01no331_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:12 2005
         (643 letters)



>mm_chr18_26450137_26451179
          Length = 1043

 Score = 1220 bits (631), Expect = 0.0
 Identities = 640/643 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   taagtcagtacttgtgtctttaattgacttagaatatttggcaatagggacacagaaaca 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 taagtcagtacctgtgtctttaattgacttagaatatttggcaatagggacacagaaaca 711

                                                                       
Query: 61  aaaagtaaatcttaacttccaatgccctgaccaaatatttgttcttctccagttattcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aaaagtaaatcttaacttccaatgccctgaccaaatatttgttcttctccagttattcac 651

                                                                       
Query: 121 ttaccttcaagagagcaacagaaagtcagtaacacggggctaagtggcaacctcagtaac 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttaccttcaagagagcaacagagagtcagtaacacggggctaagtggcaacctcagtaac 591

                                                                       
Query: 181 agaactgcactgccaaatcagcacccagaggccactgctctgaaaaggcacaaagaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 agaactgcactgccaaatcagcacccagaggccactgctctgaaaaggcacaaagaaaat 531

                                                                       
Query: 241 gtgtgtttcattcatttgtgccataatttccactgtactggcttggagcagagtccacag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gtgtgtttcattcatttgtgccataatttccactgtactggcttggagcagagtccacag 471

                                                                       
Query: 301 caaaatgcaaaagggactataaaccagaaagacacagccctgctcctcataaaactgctt 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 470 caaaatgcaaaagggactataaaccagaaagacgcagccctgctcctcataaaactgctt 411

                                                                       
Query: 361 aactacccaactaaaaacaacaagagcaaaaggcagcctaacaattagaggcgagatgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aactacccaactaaaaacaacaagagcaaaaggcagcctaacaattagaggcgagatgca 351

                                                                       
Query: 421 tcgcagcacatacccatctgtgccataagaaggcagcaagttcagggtggagtgagtcag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcgcagcacatacccatctgtgccataagaaggcagcaagttcagggtggagtgagtcag 291

                                                                       
Query: 481 cagctttctggaagagaccagtttccagcttgttcttaaaagtaaacaaattagtgaata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cagctttctggaagagaccagtttccagcttgttcttaaaagtaaacaaattagtgaata 231

                                                                       
Query: 541 aaatggagaacttttgcttttgaaaagtgttctctcagcttctttttgggactttcaggg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aaatggagaacttttgcttttgaaaagtgttctctcagcttctttttgggactttcaggg 171

                                                      
Query: 601 tggcagtcatgataggtccctgtctgtaaggaggacacagtca 643
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tggcagtcatgataggtccctgtctgtaaggaggacacagtca 128


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space:   653889
Effective search space used:   653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)