Query= MSMg01no331_p15.b1 MSMg01no331_p15.b1 CHROMAT_FILE:
MSMg01no331_p15.b1 PHD_FILE: MSMg01no331_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:58 2005
(561 letters)
>mm_chr18_34067387_34068347
Length = 961
Score = 926 bits (479), Expect = 0.0
Identities = 533/557 (95%), Gaps = 10/557 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcgccaataacctgccattattacagctccattcagacactcctcagagtctc 64
|||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattcctcgccaagaacctgccattattacagctccattcagacactcctcggagtctc 264
Query: 65 aggccttaaatgtcaaaaacctcttctacccatctgtaaatcctcttggtttctgtgttc 124
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 aggccttaaacatcaaaaacctcttctacccatctgtaaatcctgttggtttctgtgttc 324
Query: 125 caaagagaaaccaaatccaaacatttctccacactctcgggtaagcaatgtcaccctctc 184
||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 325 caaagagaaaccaaatccaaacatttctccacact----------cactgtcaccctctc 374
Query: 185 ctggattccttaaatggctccttctttgctgccctgccaccccatcaagccctgcctctg 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctggattccttaaacggctccttctttgctgccctgccaccccatcaagccctgcctctg 434
Query: 245 tagttaggaagagaagccattcaaagcatgagtcaaatcagttccctcttcagggaggca 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 435 tagttaggaagagaagccattcaaagcatgagtcagatcagttccctcttcagggaggca 494
Query: 305 gcctgcagcagtttcccttctgacagacatcaagccagcatcctgtggtaatcagccatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gcctgcagcagtttcccttctgacagacatcaagccagcatcctgtggtaatcagccatg 554
Query: 365 cccttccagagcacgacctactccagtccctcctctctgaggttagaaggaggaggagca 424
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cccttccagagcaggacctactccagtccctcctctctgaggttagaaggaggaggagca 614
Query: 425 ggaaacaccttatacaacaagagcatcggcagaagcctgaggtcttggaggctgtcacca 484
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 615 ggaaacaccttatacaacaagagcatcagcggaagcctgaggtcttggaggctgtcacca 674
Query: 485 ggagaagtaggaaaaaaggagcctaattatacagagtcagagcttagcaatgctgttgcc 544
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agagaagtaggaagaaaggagcctaattatacagagtcagagcttagcaatgctgttgcc 734
Query: 545 tgtggtaacacaccctc 561
|||||||||||||||||
Sbjct: 735 tgtggtaacacaccctc 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_p15.g1 MSMg01no331_p15.g1 CHROMAT_FILE:
MSMg01no331_p15.g1 PHD_FILE: MSMg01no331_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:58 2005
(417 letters)
>mm_chr18_34225656_34226474
Length = 819
Score = 731 bits (378), Expect = 0.0
Identities = 409/420 (97%), Gaps = 3/420 (0%)
Strand = Plus / Minus
Query: 1 tataaaatcattaattcatctaaacagcattaattcatgaaaaa-tcatctttatgttga 59
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 819 tataaaatcattaattcatctaaacagcattaattcatgaaaaattcatctttatgttga 760
Query: 60 tctgcaggaaatctgaccaatagggtggggtaatgcccaggaatcatgagactgtgtaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tctgcaggaaatctgaccaatagggtggggtaatgcccaggaatcatgagactgtgtaat 700
Query: 120 agtgacaggaaaggcacatcaattgcagggtgcgaccctgagatgaagtctcttgagacc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 agtgacaggaaaggcacatcaattgcagggtgcgaccctgagatgaagtctcttgagacc 640
Query: 180 ttgcctctcagaactcaccggtggctccaacaga--gctataccaatggtagcaataaca 237
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 639 ttgcctctcagaactcacccgtggctccaacagatagctataccaatggtagcaataaca 580
Query: 238 gggcagttaatacttcatagaagagtagagggggactcattaagtctttatgagcgattc 297
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 579 gggcagttaatacttcatagaaaagtagaggggggctcattaagtctttatgagcgattc 520
Query: 298 cagccctcccttccctcctgccccaaacctgtgatcttgagggttggcacaccttatagg 357
||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct: 519 cagccctcccttccctcctgccccaaacctgtgatcttgagggttggtagagtttatagg 460
Query: 358 cggtgggagattagccgaaggcagaacttctttatgcggctttggggaagtcacgctgaa 417
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cggtgggagattagctgaaggcagaacttctttatgcggctttggggaagtcacgctgaa 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 819
Length adjustment: 9
Effective length of query: 408
Effective length of database: 810
Effective search space: 330480
Effective search space used: 330480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
