TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGAAAGAATCCGCGGA
ATTCTCAACATTTCCAATCTCTTAAAGAAATGTTTAACATCCTTAGTCGG
CAGGGAAATTAAAATCAAAATAATTCTGAGGTTCCACCTTATGCCATCAG
AATGGCTAAGATCAAAACTCAAGTGCCAGCATCTGCTGGAGAGGATGTGG
AGCAAGCAGAACACTCCTCCATAGCTGGTGGGAGTGAAAAATTCTACAAC
CACTTTGACAATCAATTTGCCAGTTTCTCAGAAAATTGGTAATAGTTCTA
TCCCATACCACAAAACTGAGTTATACCACTCCTGGGCATATGTCCTAAAG
ATACCCCACTGTCACACAAGAGAACTTGGTCAACTATATTCATAGATGCT
TTATTCGTAATAACTGGAAATTGGCAACAACCTACATGTCCCTCAATTGA
AGAATGGACAAAGAACATGTGGTACATCTATGCAATGGAATACCACTCAG
TTATTAAAAACAAATACAACAGGAACTGTGCAGGCAAATGAATGAAACTA
AAAAATATCATCCTGAGGGAGGTAACCCAAACTCAGAAAGATACACATGG
TATGTACTCACTCAGAAGAGGAAACGAAATAGTCATGGGAGGTAGATGGA
GGGATGGAACTACATGGAAGAGGGGGTGAGGGGGGCAATAAGGATGGAGA
TCAGTGGTGGGGGAGAAGGNTTANAGNG

CCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATAAGAAAAACAATACATGTTTTAA
ATTATGTATTTTATTTCAGCCATAAATATTTGCAAAAGAACATGTTTGTT
TGTTTTTTTGTTTTGTTTTTTGTTTTTTGTTTTTTTTTGCTGGCGGTAAC
GTTCAGGAATGTTGAATTATTTTATATATATATATATATATCAGTCTTGT
AGGCAGAGAGATAAAATACTGTTAAATAATTCCCAAAGTAACTAACTTTC
TTAGAGAACTGTGATACTAATACTTATCTAAATTATTTTTTCCCTATAGA
AATTGTTTATTTCCTTTCAAATTAGTGAAGATATACTCTTTTGATGCTTT
CCCTTTTAGCCTATTGACCCCCCCAAACAGCTTGTGCTCATTCCCTTTAA
AACATTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCCCT
TTCCTAGTTTCCCCTCCCCTATCCCCTCCCCCCTTGCCCTGCTCACCAAC
ACCTCCTTCCTGGGCCTGGCATTCCCCTATACTGGGACATAAAACCTTGA
TAAGACCAAAGGCCTCTCCTCCCATTGATGACTGACTAGGCCATCTTCTG
CTACATATGTATCTAGAGCCCCGAGTCCAGTGCTTCCTCTGATTGCCGCT
TTATTCCCCATCACCN

Query= MSMg01no333_f07.g1 MSMg01no333_f07.g1 CHROMAT_FILE:
MSMg01no333_f07.g1 PHD_FILE: MSMg01no333_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:29 2005
         (342 letters)



>mm_chr18_87620340_87621081
          Length = 742

 Score =  571 bits (295), Expect = e-167
 Identities = 340/371 (91%), Gaps = 29/371 (7%)
 Strand = Plus / Minus

                                                                       
Query: 1   ataagaaaaacaatacatgttttaaattatgtattttatttcagccataaatatttgcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ataagaaaaacaatacatgttttaaattatgtattttatttcagccataaatatttgcaa 678

                                                                       
Query: 61  aagaacatgtttgtttgt-----ttttttg--ttttgttttttg---ttttttgttt--- 107
           |||||||||||| |||||     |||||||  ||||||||||||   ||||||||||   
Sbjct: 677 aagaacatgtttttttgtttttgttttttgttttttgttttttgtttttttttgtttttg 618

                                                                       
Query: 108 ttttttgctggcggtaacgttcaggaatgttgaattattt----------------tata 151
           ||||||||||||||||||||||||||||||||||||||||                ||||
Sbjct: 617 ttttttgctggcggtaacgttcaggaatgttgaattattttatatatatatatatatata 558

                                                                       
Query: 152 tatatatatatatatcagtcttgtaggcagagagataaaatactgttaaataattcccaa 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tatatatatatatatcagtcttgtaggcagagagataaaatactgttaaataattcccaa 498

                                                                       
Query: 212 agtaactaactttcttagagaactgtgatactaatacttatctaaattattttttcccta 271
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 497 agtaactaactttcttagagaactgtgatactaatacttagctaaattattttttcccta 438

                                                                       
Query: 272 tagaaattgtttatttcctttcaaattagtgaagatatactcttttgatgctttcccttt 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tagaaattgtttatttcctttcaaattagtgaagatatactcttttgatgctttcccttt 378

                      
Query: 332 tagcctattga 342
           |||||||||||
Sbjct: 377 tagcctattga 367


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space:   244089
Effective search space used:   244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)