Query= MSMg01no333_j17.b1 MSMg01no333_j17.b1 CHROMAT_FILE:
MSMg01no333_j17.b1 PHD_FILE: MSMg01no333_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:49 2005
(339 letters)
>mm_chr18_36192011_36192749
Length = 739
Score = 646 bits (334), Expect = 0.0
Identities = 337/338 (99%)
Strand = Plus / Minus
Query: 1 ggagctgttccataaagaaggaaacttgcccagagtcctggagagaatccttccatgggg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggagctgttccatagagaaggaaacttgcccagagtcctggagagaatccttccatgggg 479
Query: 61 cctggaggagtgacaccaggaacttgtatcccataataagtctgcctgcctggcacctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cctggaggagtgacaccaggaacttgtatcccataataagtctgcctgcctggcacctgg 419
Query: 121 aagctacagttctggcttcccgaggggcaccaggcaggtaagaagaaaagtttccccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aagctacagttctggcttcccgaggggcaccaggcaggtaagaagaaaagtttccccctc 359
Query: 181 cccaaccaataggacagttagtcttaataaccccccaccttccccacccaacttccctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cccaaccaataggacagttagtcttaataaccccccaccttccccacccaacttccctaa 299
Query: 241 ctcatcctcctccccgccccaccccgcctgccccatcccccacagagccacatggattaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctcatcctcctccccgccccaccccgcctgccccatcccccacagagccacatggattaa 239
Query: 301 agcgtctgtaaggagatgacagagccctccgcccagtt 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agcgtctgtaaggagatgacagagccctccgcccagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_j17.g1 MSMg01no333_j17.g1 CHROMAT_FILE:
MSMg01no333_j17.g1 PHD_FILE: MSMg01no333_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:49 2005
(453 letters)
>mm_chr18_36048107_36048959
Length = 853
Score = 814 bits (421), Expect = 0.0
Identities = 443/451 (98%), Gaps = 2/451 (0%)
Strand = Plus / Plus
Query: 1 cctctgagccttcaaagctgagtgcgctgtcctaatcaggacctttgccttagcttttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cctctgagccttcaaagctgagtgcgctgtcctaatcaggacctttgccttagcttttcc 262
Query: 61 gaactggaaaacgaaaaccaaaacaaaaaaaaaaaaaaaacgaccccaaggacagatttt 120
|||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||
Sbjct: 263 gaactggaaaacgaaaaccaaaac--aaacaaaaaaaaaacgaccccaaggacacatttt 320
Query: 121 tcgggaccacttggcaaacactgtgttaagcaattaaacgtacttcgaaagtacttaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgggaccacttggcaaacactgtgttaagcaattaaacgtacttcgaaagtacttaaac 380
Query: 181 cttacaggaccattttgctgatgagcaagcagaggcacagaaaggctgggaccctaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttacaggaccattttgctgatgagcaagcagaggcacagaaaggctgggaccctaagtc 440
Query: 241 agataggcaggtctaggctctgactccagaactggcctttttagttacaggaggtctctt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agataggcaggcctaggctctgactccagaactggcctttttagttacaggaggtctctt 500
Query: 301 cttggcaaggcctgtggagttgtggaccaaatataggtcgaccccccagggcatccgtta 360
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 cttggcagggcctgtggagttgtggaccaaatataggtcgattccccagggcatccgtta 560
Query: 361 agtgcggagagcccctcggcaagagcggcacatgttccctagcttggttataggcacgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgcggagagcccctcggcaagagcggcacatgttccctagcttggttataggcacgtg 620
Query: 421 ttacatggcgcagtcccgcgtgccaaagcgg 451
|||||||||||||||||||||||||||||||
Sbjct: 621 ttacatggcgcagtcccgcgtgccaaagcgg 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
