GCGCTATACGACTCACTATATTTCGAGGATCCGCGGAATTCACTCGCCAT
TTCCCCAAAGATCACCTGCAGCTGCCAGGGACCACACAGCCCTTTCTCCA
TCCACACTCTCAGCTCAGCTCAGCATTCACCTGCTAACCCTTTGTGTTTT
CTTCAGCTCTCAAGAGGCCTCTGGGGTTTTTTCCCCCAGTTTTTCATACT
GGGAACAAAATATATGTGATGTGTAATTCACCATCTCACACATGTGAAAT
GTGCACACGTCAGTGGTATGAAATGCATGTGTAACAAGCTGCCATCATCG
CCACCCATCTGCAGACACTCTTCATCTGGGAAAAGCCAAAACTCTTGTCA
CACCTACTTAACAGTAACACTTCAGTTGCTCTGTTTGACCTGCAGTAGTT
GCCACTTCAACTTGTGTCCTTTTTAGGTCACTAGTGTAAGAATGTCGTTG
TCCTTTGTGTCTAGCTTGTTGGGGGCTAATATAAAGTTGTCGAACTTCAT
GTATGCTGTGAGGTACACTGGCATTACCCTCGTGAGTGTGCAGTGACAGG
CAGTGGTAGCAGACACCTTTAATCCCAGCACTTGGGAGGTGCAGGCAGAT
GGATCTCTGTGAGTTCGAGGACAGTCTTGTCTACAGAGTGAGTTCTAAGG
CAGACAGGCTTATCAGAGAAACCCTGTCTACGGAAAAAAAAAGAGCGTGN
GTGTGTGTGTGTGTTCGCATTTTGCGCGGATATATGTGCGAAAAACATGG
T

TGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTCCAGAAGCAAGCACCCTTTTCTCCTTAGAGGNNNAGG
GGAGGAGATGAGGAGGAGAGNATTTTTTTNTTTTTTTTTTTTTTTGCTTT
TTTTTTTTTTTGGGGGGGGGGCCTTTACTCCCCCCCTCCTCCCTCCTTCC
CCCTCCTTTCTCTCCTCCTCCTCTTTCCTTTCCCCCCTCTTCTCCCCCCT
TTTTTTTTTCCCTCCTCTCCCCCCTGCTTTCGCTCTCTTATCTTTCCTTT
CCTCCGCCCCGGTCCTTCCGCCCCCCGTTTTTTTTTTTTTTTGTCCCGCT
CCCCTCTCTCCCCTTCTTTTCCCCCCTCTTTTTCTCTACCCCTCCCCCCT
CTTTCTGCAGCCTTGTCTTCTCCCCCTCTCTATTTTTTTCTCCCGCTTTC
TCCCTCTCTCTCCTTTTTCTCCCCTCACCCCACCTATTCTTTTATTACCT
ACTCTTCTTCACATCTTCTTAACCCCCTCTCACTACTCCCATAGTTATTT
CTCCTTTCTTATCTATCCCCTCTCTAGCTCTATCTTCTTCCCCATCTTCC
ACCATCTATTCCCTTATTCTTATCCCACTCCCTTAACTCATTTTTTCACA
CCTCTCTTCGCCTGTCTTCTACCCAATTCTACTTGCCTCACCTATATCGA
CAGTCCTCTCTTTCTCCTTCCTGCCTTTTTTTATTCGCTTTCGTCTCCTT
CTCTTACTATCTTCTTTTCGCGAGCCCCGCGATTATTAATCTCGCTTCAT
TCGCTCCTTCTACGCCTCCCTTCGCTTTTCGTTCTCCTCTTTTTTTTATA
TACCACTCTCTTCTCTTATTTCCCCCTTTTTTTATCTCACTCCCTTCTTT
CCGCTCTCTCTTTATTATCTCCCGT

Query= MSMg01no335_d18.b1 MSMg01no335_d18.b1 CHROMAT_FILE:
MSMg01no335_d18.b1 PHD_FILE: MSMg01no335_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:55 2005
         (556 letters)



>mm_chr18_5018360_5019315
          Length = 956

 Score =  957 bits (495), Expect = 0.0
 Identities = 537/555 (96%), Gaps = 8/555 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcactcgccatttc----cccaaagatcacctgcagctgccagggaccacacagcc 61
           ||||||||||||||        ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcactcgcca----ggggcccaaagatcacctgcagctgccagggaccacacagcc 261

                                                                       
Query: 62  ctttctccatccacactctcagctcagctcagcattcacctgctaaccctttgtgttttc 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctttctccatccacactctcagctcagctcagcattcacctgctaaccctttgtgttttc 321

                                                                       
Query: 122 ttcagctctcaagaggcctctggggttttttcccccagtttttcatactgggaacaaaat 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcagctctcaagaggcctctggggttttttcccccagtttttcatactgggaacaaaat 381

                                                                       
Query: 182 atatgtgatgtgtaattcaccatctcacacatgtgaaatgtgcacacgtcagtggtatga 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atatgtgatgtgtaattcaccatctcacacatgtgaaatgtgcacacgtcagtggtatga 441

                                                                       
Query: 242 aatgcatgtgtaacaagctgccatcatcgccacccatctgcagacactcttcatctggga 301
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aatgcttgtgtaacaagctgccatcatcgccacccatctgcagacactcttcatctggga 501

                                                                       
Query: 302 aaagccaaaactcttgtcacacctacttaacagtaacacttcagttgctctgtttgacct 361
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 502 aaagccaaaactcttgtcacacctacttaacagtaacacttcagttgctctgcttgacct 561

                                                                       
Query: 362 gcagtagttgccacttcaacttgtgtcctttttaggtcactagtgtaagaatgtcgttgt 421
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 562 gcagtagttgccactccaacttgtgtcctttttaggtcactagtgtaagaatgtcattgt 621

                                                                       
Query: 422 cctttgtgtctagcttgttgggggctaatataaagttgtcgaacttcatgtatgctgtga 481
           ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 622 cctttgtgtatagcttgttgggggctaatataaagttgtcgaatttcacgtatgctgtga 681

                                                                       
Query: 482 ggtacactggcattaccctcgtgagtgtgcagtgacaggcagtggtagcagacaccttta 541
           |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 682 ggtacattggcattaccctcgtgactgtgcagtgacagtcagtggtagcagacaccttta 741

                          
Query: 542 atcccagcacttggg 556
           |||||||||||||||
Sbjct: 742 atcccagcacttggg 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)