NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTTATCTCTATAACCCCCTTTTTTTTTTAAATAAGGTTATT
TGGTTCTATGGAGTATAACTTTTTGAGTTCTTGGTATATATTGAATATTA
GCTCTCTATCAGATTTAGGATGGGTAAAGATCTTTTCCTAATCTGTTGGT
TGTCTTTTTTTCTTATTCACGGTGTCCTTTGCCTTACAGAAGCTTTGTAA
TTTTATGAGGTCCCATTTGTCAACTCTTGATCTTACAGCACAAACCACTG
GTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCCTATGTTCAAGGCTATCT
TTTTTTCCACTAGATGGTTTTTGCTCCTGTGTCAAATGACCATAGGTGTG
TGGGTTCACTTCTGGGTCTTCAATTATATTCCATTGATCTACCTGCCTGT
CACTGTACCAATACCATGCAGGTTTTATCACAACTGCTCTATAGTACAGC
TTGAGGTCAGGGATGGTGATTCCACCAGAGAACCCAGCAATACCACTCCT
GGACATATACCCAGAAGATGTTCCAACTTGTAATAAGGAAACATGCTCCA
CTGTGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGTCCCTCAATAGAGGAATGGATACCGAAAATGTGGTACATTTACCC
AATGGAGTACTACTCAGCTAATAAAAGAATGAATTTATGAA

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAATAGAAGACACGGAGACATCACT
GAAAATGCCAACATTTCAAAGCTATATATTTTAGTTCTAATAACAGAGGA
CAGATTAATTTTCTTTAGAGCATAGGAAATACCTAACTCCCTCTCAGTTT
AGTTAGGATAAACTTTTATTCTCTGTTTAAATTTTACCATAAAGTACAAA
AGGCTGAGCCTATGAGAATACAAATATCCCAATAACTAGACACTGGCTAG
ACAAGGTTTTTGTACTTCTGTAAAAAAAAAAAAATTGAAATTCAGTCATG
GTTCCCTTGAGTCTCAAGGGAAATAATTTTTTTCTGTTGAAACTCAGATA
CAGTTTACCCCATACTGAGATAACAGAGGCATTGATTTCCAAAGCAGCCA
GAAGGGATTAAAAAATGTGTTCAACTTTTTTTTTCACCTTCAGTTTTTGA
GATTTCACTATACCATGCACAGTATACTATATTTAGAGGAGCCTTAATTT
TTTCAGGGTACTTTCAACACTGATAAATTTTAATTTCTTCATTAAATTGG
TAACCTTGAGCGAACATTATTTTCCTTGAATAATTAGATAGTAAATTATC
TTTTTATGGTCCGGGCAGTGGCTCATACTTTAAGGGATCGCGGTTTTTAT
AATTCAATAAGGGGGACCTTTTTTAATCCCTTCGGATTTTCCCCTTGGGT
ATATGCATCTN

Query= MSMg01no337_c05.g1 MSMg01no337_c05.g1 CHROMAT_FILE:
MSMg01no337_c05.g1 PHD_FILE: MSMg01no337_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:25 2005
         (492 letters)



>mm_chr18_50610644_50611535
          Length = 892

 Score =  920 bits (476), Expect = 0.0
 Identities = 489/494 (98%), Gaps = 4/494 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatagaagacacggagacatcactgaaaatgccaacatttcaaagctatatattttagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatagaagacacggagacatcactgaaaatgccaacatttcaaagctatatattttagt 260

                                                                       
Query: 61  tctaataacagaggacagattaattttctttagagcataggaaatacctaactccctctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaataacagaggacagattaattttctttagagcataggaaatacctaactccctctc 320

                                                                       
Query: 121 agtttagttaggataaacttttattctctgtttaaattttaccataaagtacaaaaggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttagttaggataaacttttattctctgtttaaattttaccataaagtacaaaaggct 380

                                                                       
Query: 181 gagcctatgagaatacaaatatcccaataactagacactggctagacaaggtttttgtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcctatgagaatacaaatatcccaataactagacactggctagacaaggtttttgtac 440

                                                                       
Query: 241 ttctgtaaaaaaaaaaaaattgaaattcagtcatggttcccttgagtctcaagggaaata 300
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgtaaaaaaaaaaaa--tgaaattcagtcatggttcccttgagtctcaagggaaata 498

                                                                       
Query: 301 atttttttctgttgaaactcagatacagtttaccccatactgagataacagaggcattga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atttttttctgttgaaactcagatacagtttaccccatactgagataacagaggcattga 558

                                                                       
Query: 361 tttccaaagcagccagaagggattaaaaaatgtgttcaacttttttttt-caccttcagt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 559 tttccaaagcagccagaagggattaaaaaatgtgttcaacttttttttttcaccttcagt 618

                                                                       
Query: 420 ttttgagatttcactataccatgcacagtatactatatttagaggagccttaatttttt- 478
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| 
Sbjct: 619 ttttgagatttcactataccatgcacagtatactatatttagaggaaccttaattttttt 678

                         
Query: 479 cagggtactttcaa 492
           ||||||||||||||
Sbjct: 679 cagggtactttcaa 692


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space:   425124
Effective search space used:   425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)