Query= MSMg01no337_p19.b1 MSMg01no337_p19.b1 CHROMAT_FILE:
MSMg01no337_p19.b1 PHD_FILE: MSMg01no337_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:31 2005
(435 letters)
>mm_chr18_74225238_74226073
Length = 836
Score = 804 bits (416), Expect = 0.0
Identities = 428/432 (99%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 5 gaattctccctcttctcc-ccaaagcacccagcaagtgggggctgcacttgtacacttaa 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctcttctcatccaaagcacccagcaagtgggggctgcacttgtacacttaa 264
Query: 64 ccaagtctaatgtgccaggtgtttatgtctgcccattctggagagcggtacaatttctga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaagtctaatgtgccaggtgtttatgtctgcccattctggagagcggtacaatttctga 324
Query: 124 tacttcatagatactcagtaactactgaaattatttgggttgtatagcctcactaagggg 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 325 tacttcatagatactcagtaactactgaaattatttgggttgtataacctcactaagggg 384
Query: 184 taacatggattaaaaaaatgtaaaacttagaaactgtgggattgcattggaagctgtaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taacatggattaaaaaaatgtaaaacttagaaactgtgggattgcattggaagctgtaac 444
Query: 244 aagtgcttaactcggtggtagtcgtgtaaagggaacagatggtagttataatctctgtgc 303
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagtgcttaactcggtggtagtcctgtaaagggaacagatggtagttataatctctgtgc 504
Query: 304 agatatacttgtcgttaatcctatgtatgtaggtagccaagaagtttgagactaactata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agatatacttgtcgttaatcctatgtatgtaggtagccaagaagtttgagactaactata 564
Query: 364 gctaggttagagagaggagttacctggacttgcattgatctaaaaggagaggttgaggtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctaggttagagagaggagttacctggacttgcattgatctaaaaggagaggttgaggtt 624
Query: 424 ggtgtgtctgca 435
||||||||||||
Sbjct: 625 ggtgtgtctgca 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 836
Length adjustment: 9
Effective length of query: 426
Effective length of database: 827
Effective search space: 352302
Effective search space used: 352302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_p19.g1 MSMg01no337_p19.g1 CHROMAT_FILE:
MSMg01no337_p19.g1 PHD_FILE: MSMg01no337_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:31 2005
(445 letters)
>mm_chr18_74397555_74398399
Length = 845
Score = 841 bits (435), Expect = 0.0
Identities = 438/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Minus
Query: 5 gccccaaggaccaagaccagggaaatcaccttggggagagagaaaggagaaggggaagag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gccccaaggaccaagaccagggaaatcaccttggggagagagaaaggagaaggggaagag 408
Query: 65 aaaaagagagttagtttcagaaccccccttgactcagggtctaaaatcaaacaccaggga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aaaaagagagttagtttcagaaccccccttgactcagggtctaaaatcaaacaccaggga 348
Query: 125 caaagcagttatcaaccatgaatgcttgatagtgggaaaaacgttgacactaggggagtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caaagcagttatcaaccatgaatgcttgatagtgggaaaaacgttgacactaggggagtc 288
Query: 185 acagtcaggtctccagtggttctcaaccttcctaatgctgggaccctttaatacagccac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 acagtcaggtctccagtggttctcaaccttcctaatgctgggaccctttaatacagccac 228
Query: 245 tcatgttgtccctcagctaagcccatctgacttaacctgaccctggcattgtgtctctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tcatgttgtccctcagctaagcccatctgacttaacctgaccctggcattgtgtctctcc 168
Query: 305 atggggctctccctgctcttcctttcatgcttctgtctcctgggtctggttgttagctcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atggggctctccctgctcttcctttcatgcttctgtctcctgggtctggttgttagctcc 108
Query: 365 tgcagccagctcttttttatgcaaaaaaagccattcagtgtaaaccaatcagcatcagga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tgcagccagctcttttttatgcaaaaaaagccattcagtgtaaaccaatcagcatcagga 48
Query: 425 caatagacactccccaccc 443
|||||||||| ||||||||
Sbjct: 47 caatagacac-ccccaccc 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
