Query= MSMg01no338_b06.b1 MSMg01no338_b06.b1 CHROMAT_FILE:
MSMg01no338_b06.b1 PHD_FILE: MSMg01no338_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:38 2005
(608 letters)
>mm_chr3_151315738_151316745
Length = 1008
Score = 1152 bits (596), Expect = 0.0
Identities = 602/604 (99%)
Strand = Plus / Minus
Query: 5 gaattcaggaggaacactcaattttggattctcatgttttgggaagatatcaaagggcct 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gaattcaggaggaagactcaattttggattctcatgttttgggaagatatcaaagggcct 749
Query: 65 agtatttttggtatataaaaaggaatctatatactgtgcagatgacgatgtgtccttctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 agtatttttggtatataaaaaggaatctatatactgtgcagatgacgatgtgtccttctc 689
Query: 125 gttgctatgactcatctctggggttttcttcacttcttactgctctgccttttccatttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gttgctatgactcatctctggggttttcttcacttcttactgctctgccttttccatttt 629
Query: 185 ttaaactcatgctgccccttgttttctctctgggcttttaaactagacattccatttcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttaaactcatgctgccccttgttttctctctgggcttttaaactagacattccatttcct 569
Query: 245 tgttttatatttttttagatattgagtcttgttcctcctatgttaagtgctaaaaatcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgttttatatttttttagatattgagtcttgttcctcctatgttaagtgctaaaaatcca 509
Query: 305 tgagttttgagtcaaatggacaaatgcttgaaactcatcctctaaaatgatttctcattg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgagttttgagtcaaatggacaaatgcttgaaactcatcctctaaaatgatttctcattg 449
Query: 365 ggctaaaaaggccacagagagaacacatgatggggaaaggtgtgcccgagtgtcagtgag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggctaaaaaggccacagagagaacacatgatggggaaaggtgtgcccgagtgtcagtgag 389
Query: 425 cagaagggtactgcacactttgaaaaacaaatactattcagacttaaatattggtagaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cagaagggtactgcacactttgaaaaacaaatactattcagacttaaatattggtagaag 329
Query: 485 gccatgtacttgagcagcagtgagtcagaggagcatggtaaaatgacaaaggcacacaca 544
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 328 gccatgtacttgagcagcagtgggtcagaggagcatggtaaaatgacaaaggcacacaca 269
Query: 545 gtgaacctctttgtgaatggtcatggggcgaaagctaattgagaagtcatatgtgtgtga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtgaacctctttgtgaatggtcatggggcgaaagctaattgagaagtcatatgtgtgtga 209
Query: 605 acat 608
||||
Sbjct: 208 acat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_b06.g1 MSMg01no338_b06.g1 CHROMAT_FILE:
MSMg01no338_b06.g1 PHD_FILE: MSMg01no338_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:38 2005
(531 letters)
>mm_chr18_50570305_50571234
Length = 930
Score = 847 bits (438), Expect = 0.0
Identities = 510/548 (93%), Gaps = 25/548 (4%)
Strand = Plus / Plus
Query: 1 tgtgaggggaagaagtggagggggcagcaattggaatgttaaacatacaaaaaaacaaaa 60
||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 181 tgtgagggggagaagtggagggggcagcaattggaatgtaaaacaaac-aaaaaacaaaa 239
Query: 61 acaaaaaagtcaggcaagcaagtaaaca---------------------aacaacaacaa 99
||| |||||||||||||||||||||||| |||||||||||
Sbjct: 240 acacaaaagtcaggcaagcaagtaaacaaacaaacaaacaaacaacaacaacaacaacaa 299
Query: 100 caacaacaaaaagaaaagatatgtatcctctaggtcaattaggtgcagaaaggcttggga 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 caacaacaaaaagaaaagatatgtatcctctaggtcaattaggtgcagaaaggcttggga 359
Query: 160 cattggtgctgtgttgagcacagagctactaagggtatgtttttaaacagtgatgcctgg 219
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 360 cattggtgctgtgttgagcacagag-aactaaggatatgtttttaaacagtgatgcctga 418
Query: 220 tgatgatagcatatggggcaaatgtcagggcctggtacaggatggtactatatttctaag 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgatgatagcatatggggcaaatgtcagggcctggtacaggatggtactatatttctaag 478
Query: 280 agccattgtaaatgatcgatgttaaggagagggaaacttaagactttccatatggaagtc 339
|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 479 aggtattgtaaatgatcgatgttaaggagagggaagcttaagactttccatatggaagtc 538
Query: 340 tgaattctaacttcaattgtgaaggtagactcaaataatttttaaagtaaaaatgattta 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgaattctaacttcaattgtgaaggtagactcaaataatttttaaagtaaaaatgattta 598
Query: 400 atatatatccatatatatgtttattaaatatatacatatatggaatatattctccaagta 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 atatatatccatatatatgtttattaaatatatacatatatggaatatattctccaagta 658
Query: 460 aagtgataactccctccatccaggagagagagagagagagagagagagagagagagagag 519
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 659 --gtcataactccctccatccaggagagagagagagagagagagggagagagagagaggg 716
Query: 520 agagagag 527
||||||||
Sbjct: 717 agagagag 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space: 479320
Effective search space used: 479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
