Query= MSMg01no338_d05.b1 MSMg01no338_d05.b1 CHROMAT_FILE:
MSMg01no338_d05.b1 PHD_FILE: MSMg01no338_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:47 2005
(547 letters)
>mm_chr18_64970491_64971437
Length = 947
Score = 1035 bits (535), Expect = 0.0
Identities = 541/543 (99%)
Strand = Plus / Plus
Query: 5 gaattccttcactgtactgccttctcagattgcatgttcatttttgcagctacctatgaa 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcactgaaatgccttctcagattgcatgttcatttttgcagctacctatgaa 264
Query: 65 acctcttggtcaaaggaggaagccaatggaaggaagatgcctagcaacagcagaagggtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctcttggtcaaaggaggaagccaatggaaggaagatgcctagcaacagcagaagggtg 324
Query: 125 ggatgcggatggtttccaagtaactggcagcatccaccatgtgagcagccatgttttcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatgcggatggtttccaagtaactggcagcatccaccatgtgagcagccatgttttcca 384
Query: 185 tagtccttcctacagaccccaccctggctgagatttagtggaaccagggagtaaccccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtccttcctacagaccccaccctggctgagatttagtggaaccagggagtaaccccag 444
Query: 245 catctccacttgaagccaccttgaggaagctgtcaggcagcgctcacactacactcagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catctccacttgaagccaccttgaggaagctgtcaggcagcgctcacactacactcagca 504
Query: 305 agtacagtgctagtgagtctcttctcagagcgaagagaaacatgttctgcatgatgggcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtacagtgctagtgagtctcttctcagagcgaagagaaacatgttctgcatgatgggcc 564
Query: 365 accatttgaactatggctcccttgttgctaactccaggtagtctgtcatgggaaggtttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accatttgaactatggctcccttgttgctaactccaggtagtctgtcatgggaaggtttc 624
Query: 425 tttttcccccagaggcgtccatctgtcacaaatcatgatgcgcacatgcctcttgggttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttttcccccagaggcgtccatctgtcacaaatcatgatgcgcacatgcctcttgggttg 684
Query: 485 tgtgggagagccttcactgcttttgtgtgtgtgtgttgcatgtatatgcattgctatggg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtgggagagccttcactgcttttgtgtgtgtgtgttgcatgtatatgcattgctatggg 744
Query: 545 gtt 547
|||
Sbjct: 745 gtt 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_d05.g1 MSMg01no338_d05.g1 CHROMAT_FILE:
MSMg01no338_d05.g1 PHD_FILE: MSMg01no338_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:47 2005
(556 letters)
>mm_chr18_65116431_65117387
Length = 957
Score = 1019 bits (527), Expect = 0.0
Identities = 542/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Minus
Query: 1 tgttttgaaaacaaacgctgcaagcagctctcacctcctaccaaactcacccccttccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgttttgaaaacaaacgctgcaagcagctctcacctcctaccaaactcacccccttccca 688
Query: 61 agcacagcctgttatgcatgcgtgacaggcgctccacagcgtggaactaaccacactgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agcacagcctgttatgcatgcgtgacaggcgctccacagcgtggaactaaccacactgta 628
Query: 121 tccgacacactcagcggagcggttactgtaggtagggaatcattaactgtacagtgagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tccgacacactcagcggagcggttactgtaggtagggaatcattaactgtacagtgagag 568
Query: 181 tgctcgtggcgacccagaggccaagttcagccaggagaaagcaaggcttccagtgccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgctcgtggcgacccagaggccaagttcagccaggagaaagcaaggcttccagtgccctc 508
Query: 241 agcctcccagacttcagcctggacttcatcctatgctccaggcatttcaatgtgtcctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agcctcccagacttcagcctggacttcatcctatgctccaggcatttcaatgtgtcctcc 448
Query: 301 gccacactgtgccacacagagcaagggtta-acaccccagcacagagccttggttaagaa 359
||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 447 gccacactgtgccacacggagcaagggttacacaccccagcacagaaccttggttaagaa 388
Query: 360 tcagagtgagccatgtctgcccactgaagttgggaaagagaggctcaccccaaactgccc 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 387 tcagagtgagccatgtctgcccactgcagttgggaaagagaggctcaccccaaactgccc 328
Query: 420 accctcctcgcaccaggtaatctgacgaagcatgaataagacagtaggcaatgagggtgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 accctcctcgcaccaggtaatctgacgaagcatgaataagacagtaggcaatgagggtgg 268
Query: 480 agaaaggaacgggctttaggaattaggatttcattgtttatgtaacagacctgttatctt 539
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 267 agaaaggaacgggctttaggaattaggatttcattgtttatgtcacagacctgttatctt 208
Query: 540 ggaactc 546
|||||||
Sbjct: 207 ggaactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 957
Length adjustment: 10
Effective length of query: 546
Effective length of database: 947
Effective search space: 517062
Effective search space used: 517062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
