Query= MSMg01no339_c06.b1 MSMg01no339_c06.b1 CHROMAT_FILE:
MSMg01no339_c06.b1 PHD_FILE: MSMg01no339_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:55 2005
(464 letters)
>mm_chr18_75159945_75160809
Length = 865
Score = 803 bits (415), Expect = 0.0
Identities = 442/451 (98%), Gaps = 1/451 (0%)
Strand = Plus / Plus
Query: 5 gaattctcccattacccttcgcgcttcctcttcctgtaagcggccagaggtgagtgctaa 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcccagtagccttcgcgcttcctcttcctgtaagcggccagaggtgagtgctaa 264
Query: 65 ctcggcgccgggctctcggggcgaatcctccgccatcgttgctgtcgtggctccgggagc 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 ctcggcgccgggctctcggggcgaatcctccgccatcgttgttgtcgtggctccgggagc 324
Query: 125 gctggggcgtcgccatcccggcagctgagctccaagggccatgggtcctcgccgcgggtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctggggcgtcgccatcccggcagctgagctccaagggccatgggtcctcgccgcgggtg 384
Query: 185 gccgtgctctgcgtggaggggcgcgcgggcgcctccgacttggagccccggggcgtgcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gccgtgctctgcgtggaggggcgcgcgggcgcctccgacttggagccccggggcgtgcag 444
Query: 245 gctgcggagcagcgagagggggcgggcatgtgtgacggggccaggccgccggcggagctg 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 gctgcggagcagcgagagggggcgggcatgggtgacggggccaggccgccggcggagctg 504
Query: 305 cggggggctcggaccggacggggacgcccgaggctcggcttctacggtgaggggtggcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cggggggctcggaccggacggggacgcccgaggctcggcttctacggtgaggggtggcct 564
Query: 365 aggacggagcgggagtgctgagatcggcgcccggtggaggctgcgaggtcgggggcagg- 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggacggagcgggagtgctgagatcggcgcccggtggaggctgcgaggtcgggggcagga 624
Query: 424 ggggtcctcaccgcgctgtacctaagcctga 454
||||||| ||| || |||| |||||||||||
Sbjct: 625 ggggtccgcactgctctgtgcctaagcctga 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_c06.g1 MSMg01no339_c06.g1 CHROMAT_FILE:
MSMg01no339_c06.g1 PHD_FILE: MSMg01no339_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:55 2005
(466 letters)
>mm_chr18_75292723_75293588
Length = 866
Score = 886 bits (458), Expect = 0.0
Identities = 464/466 (99%)
Strand = Plus / Minus
Query: 1 tctatgaaaaagtcagatcacacgcactgctgggatttggtaaatactgcacgtttatga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 590 tctatgaaaaagtcagatcacacgcactgctgggatttggtaaatactgcacatttatga 531
Query: 61 tggctagagctctagagtccctcacaggagcttgctgagacccacccattcaagtaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tggctagagctctagagtccctcacaggagcttgctgagacccacccattcaagtaaact 471
Query: 121 gctactatcaaaaacctctgcctacatccaatggcatcaccatttgcatcatttccggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gctactatcaaaaacctctgcctacatccaatggcatcaccatttgcatcatttccggaa 411
Query: 181 atattgactatcagaagataccagggcacttgagaggctgaaagagaatggacttaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atattgactatcagaagataccagggcacttgagaggctgaaagagaatggacttaggtt 351
Query: 241 caactcatcccaggcaggccatgcagcaagttcaaggatagcctgtggtacaaagtagat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 350 caactcatcccaggcaggccatgcagcaagttcaaggatagcctgtggtacaaagtggat 291
Query: 301 ctcttgcaaaggtaatggaagccagaagggatagggaagagctgagagcaaagccctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctcttgcaaaggtaatggaagccagaagggatagggaagagctgagagcaaagccctttc 231
Query: 361 tttcaccaggtaccttggacaagacctctgagatgtgcccaacctgtggcccaggggcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tttcaccaggtaccttggacaagacctctgagatgtgcccaacctgtggcccaggggcca 171
Query: 421 catacagctgagaaaccagcacaaaactgttgatcacacatttgtc 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 catacagctgagaaaccagcacaaaactgttgatcacacatttgtc 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
