NNTTTCCATCGTGGAGGTGGCGGCCGCTAGAGGACTCACTATTTCGAGAG
GATCCGCGGAATTCCACAACATTCTAAAAGATTTCTGAGCAATGCCTGCC
ACCAACTGAGCCAACAGTAGCACATAGTGTTGATTTGAGCTTCAGTTTTC
CAACCTATAAAATGAAGGGAAAGGCAAAACCACGATCCTTTACTCAGGAT
AAAACAGGCAGCTGGGTACTCACCCTCTCCGATTTCTGTGTGAGTCATAT
TCAGATTGTTTATGGCACTGCTTCAACCATTTGCACTGCTCTCTCTAGGC
CCCTTTATCTACCATCTTTCTCACAGTAGAATCATAGAGCCAAGAATATT
ATGTCCATGAGGGATCTAAACCACACAACTGGCGAGAGAGAGAGAGAGAC
TAAAAAGGACTGTGTACTCATCCTGATATCCCATTGTACAGATCTCTGGC
ACAAAGATGGTCTGATGCAGTTTGGACTTAAACATCTCAGCCCCAAGGAA
CTTATTACTCACACAGAAATTGCTTTACTTACTAGAGAGACTCCCAAAAT
GCTTAGTTTCCTCTGCCTTCCAGGAAATTTCAAACCTATAGAACATTTGG
CCGACAGCTCACCACTCACTCTAATGGTGATGGCAACATTATTGTTTATC
ATTTGGAAAATGTAAAATTGCTATTGAATTCTAACTTCGGGATTCTTCTG
AGATGGAGGGGGGGGAAAAAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTATGTTAAAAACATTTGGCCCTGGGCTTTTTGTTGTTGTTGTTAG
ACTTTTAATTACTGCTTCTATTTCACTGAGATTTATAGGTCTATATCAAT
TGTCTATCTAATCTTGATTTAACTTTAGTAAAGGAAATTTATCAAAAATT
ATTCATTTCTTTTAGATTTTCTAATTTGGTCAAGTACAGGTGTTTAAAAT
ATGTCATTATACATTCTCTGAATCTCTTTGGTGTCTGTTATGCCTCCCCC
TTTATCTCTAATTTTGTCAATTTGGATACCCCTTCTCTGCCTATTTGGAT
TACTCTTTATTAATTTTTTTTCTCAAAGAACCAACATTTTGTTCCCTTGA
TTCTTTGTATTGTTTTCTTGTTACTGTTGTTGTTGTGCAATCATTGTTTT
TTTTTTTCTGGGTTATTGACTTCAGCCTTGAATTTGATTATTTCTTGCCT
GCTACTGAAAGAACCTAGTGGGGAAACCCCCACTCAATTCCCGATTCGGG
GTGCATCCAAAGAATCACGAAGAGACCGTCTTGATGTAAACATACAAGGT
AGTTTAATGACAGAGCTTCGGAACTATACGTATCTCACACAGGAGAAAAC
AGATGTCGGCCTCGAAGGCTTAAAAGTTAGGGGTTTATATAGGAAAA

Query= MSMg01no339_j02.b1 MSMg01no339_j02.b1 CHROMAT_FILE:
MSMg01no339_j02.b1 PHD_FILE: MSMg01no339_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:26 2005
         (550 letters)



>mm_chr18_74696377_74697322
          Length = 946

 Score =  994 bits (514), Expect = 0.0
 Identities = 538/548 (98%), Gaps = 4/548 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   atttctgagcaatgcctgccaccaactgagccaacagtagcacatagtgttgatttgagc 62
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 atttctgaacaatgcctgccaccaactgagccaacagtagcacatagtgttgatttgagc 776

                                                                       
Query: 63  ttcagttttccaacctataaaatgaagggaaaggcaaaaccacgatcctttactcaggat 122
           ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 775 ttcagttttccaacctataaaatgaagggaaaggcgaaaccatgatcctttactcaggat 716

                                                                       
Query: 123 aaaacaggcagctgggtactcaccctctccgatttctgtgtgagtcatattcagattgtt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aaaacaggcagctgggtactcaccctctccgatttctgtgtgagtcatattcagattgtt 656

                                                                       
Query: 183 tatggcactgcttcaaccatttgcactgctctctctaggcccctttatctaccatctttc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tatggcactgcttcaaccatttgcactgctctctctaggcccctttatctaccatctttc 596

                                                                       
Query: 243 tcacagtagaatcatagagccaagaatattatgtccatgagggatctaaaccacacaact 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcacagtagaatcatagagccaagaatattatgtccatgagggatctaaaccacacaact 536

                                                                       
Query: 303 ggcgagagagagagagagactaaaaaggactgtgtactcatcctgatatcccattgtaca 362
           |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggc----gagagagagagactaaaaaggactgtgtactcatcctgatatcccattgtaca 480

                                                                       
Query: 363 gatctctggcacaaagatggtctgatgcagtttggacttaaacatctcagccccaaggaa 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gatctctggcacaaagatggtctgatgcagtttggacttaaacatctcagccccaaggaa 420

                                                                       
Query: 423 cttattactcacacagaaattgctttacttactagagagactcccaaaatgcttagtttc 482
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 419 cttattactcacacagcaattgctttacttactagagagactcccaaaatgcttaggttc 360

                                                                       
Query: 483 ctctgccttccaggaaatttcaaacctatagaacatttggccgacagctcaccactcact 542
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 359 ctctgccttccaggaaatttcaaacctatagaacatttggctgacagctcaccactcact 300

                   
Query: 543 ctaatggt 550
           ||||||||
Sbjct: 299 ctaatggt 292


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 946
Length adjustment: 10
Effective length of query: 540
Effective length of database: 936
Effective search space:   505440
Effective search space used:   505440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)