NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTGATCTTTCCAGAACTTTTATCATGAATGGGTGTTGGAT
CTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGT
CTTTGAGTTTGTTTATATAGTGGATTACATTGATGGATTTTCGTATATTA
AACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGAT
TGCTTTAATGTGTTCTTGGATTTGGTTAGCAAGAATTTTATTGAGGATTT
TTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTT
GGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGA
GTTGGGTAGAGTACTTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAA
CTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCG
TCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTTATAACTGCTTCTAT
TTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATTCA
ACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTT
TCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTCGTTTG
GATTTCTTCAGGATCTGCTGTTATGCCTCCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTCTGTTTCGCACTGTATACATATTTATTATTATTTGTTTTATTG
ATGTCTAATATCTTGAGTTTTTAAAGTACATTTTGGATATAGTTCTTTGT
CAGAGATGGACAAAAGTAAGTGTACACACACAAAAGCACATGCACCTATA
CATATGTACAAGAACATATATAAGCACATACACATAAATACAAAACCACA
TATACACATAAGCATACACAAACACACAGCACACAAATATAAAAACATAT
ACACACATACACCCATACACACACACACACAAACATATACATATACACAC
ACACACGTGTATTTATTTTGTTAAACTAACAGCCCCTTTCTTATCAGTTT
AGGTTGACAGTTTTTCTGCTCTGGATGTTTGTGGTTCATGCAGGTCAACT
CTGACATGAGTTGGTGAGATCTTTTTCCATTCTGGAAGCTGCCATTTTGT
CCTATTGAAGGTGTCCTTTGCCCTATGGAAGCTTTTCAGTTTCATGCAGT
ACAATTGATTAATTGTTGATCTTAGTGCCCTTGAGTCCTCACCATATGCA
AAACACTACAGTCAACTAAACAGTGCTGAGAGAATGAAAAGGGCAGTACT
CTTTAGTGTAACAGTTGTATGAACGTTCTGTGTGAAATAATGAATTTCCA
AAAAGTGTCTTAAAAATTTT

Query= MSMg01no339_l05.g1 MSMg01no339_l05.g1 CHROMAT_FILE:
MSMg01no339_l05.g1 PHD_FILE: MSMg01no339_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:36 2005
         (594 letters)



>mm_chr18_41162630_41163623
          Length = 994

 Score = 1106 bits (572), Expect = 0.0
 Identities = 587/594 (98%), Gaps = 4/594 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgtttcgcactgtatacatatttattattatttgttttattgatgtctaatatcttga 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tctgtttcacactgtatacatatttattattatttgttttattgatgtctaatatcttga 838

                                                                       
Query: 61  gtttttaaagtacattttggatatagttctttgtcagagatggacaaaagtaagtgtaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gtttttaaagtacattttggatatagttctttgtcagagatggacaaaagtaagtgtaca 778

                                                                       
Query: 121 cacacaaaagcacatgcacctatacatatgtacaagaacatatataagcacatacacata 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 777 cacacaaaagcacatgcacctatacatatgtacaagcacatatataagcacatacacata 718

                                                                       
Query: 181 aatacaaaaccacatatacacataagcatacacaaacacacagcacacaaatataaaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aatacaaaaccacatatacacataagcatacacaaacacacagcacacaaatataaaaac 658

                                                                       
Query: 241 atatacacacatacacccatacacacacacacacaaacatatacatatacacacacacac 300
           ||||||||||||||||||||||||||||||||    ||||||||||||| ||||||||||
Sbjct: 657 atatacacacatacacccatacacacacacac----acatatacatatatacacacacac 602

                                                                       
Query: 301 gtgtatttattttgttaaactaacagcccctttcttatcagtttaggttgacagtttttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgtatttattttgttaaactaacagcccctttcttatcagtttaggttgacagtttttc 542

                                                                       
Query: 361 tgctctggatgtttgtggttcatgcaggtcaactctgacatgagttggtgagatcttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgctctggatgtttgtggttcatgcaggtcaactctgacatgagttggtgagatcttttt 482

                                                                       
Query: 421 ccattctggaagctgccattttgtcctattgaaggtgtcctttgccctatggaagctttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccattctggaagctgccattttgtcctattgaaggtgtcctttgccctatggaagctttt 422

                                                                       
Query: 481 cagtttcatgcagtacaattgattaattgttgatcttagtgcccttgagtcctcaccata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtttcatgcagtacaattgattaattgttgatcttagtgcccttgagtcctcaccata 362

                                                                 
Query: 541 tgcaaaacactacagtcaactaaacagtgctgagagaatgaaaagggcagtact 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcaaaacactacagtcaactaaacagtgctgagagaatgaaaagggcagtact 308


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)