NTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC
CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT
CTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA
TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC
TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGA
TCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATTGATTCGC
ATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAAT
GCTGTCTTTCTTCCAGTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGT
GACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGG
NCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCANCATTGC
TCTGTAGTAAAGCCTTATGTCAGGCATGGTGATTCCCCCAAAGGTCTTTT
ATCCTTGAAAAAAGATTTTGCTATCCTAAGGTTTTTGTA

NCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGCTATATCCCAAATAAGCT
GTACCCCTTGGAAATCTTACATCTTCAAAAGATTTCTCACATAATTTGTT
TTTAAAAAAATATTGTTAGAGGTGACAAGATCAGGGTATATACTTGCCCA
GTCTGTTAGATGAGGTCTTCCTCATGTGGAATCAGAAGAAAAAGAATACA
TATCTCTAAGAGATATTTGGGAATTAGCTGGATTGGGCTGTGGTAATGGG
TGGATCCTGGAGTGAGCAAGCAAGCTGCCAAGTGTGACTTCCTGGCTTGT
CTCCCACACTTGGAAGGATGAGGCTATCATTTAGTAAGTGCTGAAAGAGA
GCTAGAATTGAGAAGACACAGTGTTTATTTTAACAAACTGAGTTTCAGGT
TTCTTTGCAGCATCCAAAAGATGATCTGAATAACCATTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGNNNNNNNNNNNNNNNNTNNTTTNTNTT
TTNNTTNTTTTTTTTTTNTTTTNTTTTTNTTTTTTTTTTTTTTTTTTTTT
TTTTTTNTTTTTTTTTTTTNTTTTNNNTTTTTTTTTTTTTTTTTTTTTTT
TTTTTNNTTTTTTTTCTTTTTTTTTGTGGCCTTCTTTGTGGCTGTTTGGT
CTTGTCCGCTTGTTTTCTCCTTTCTTCTTTCTCTCTG

Query= MSMg01no340_k10.g1 MSMg01no340_k10.g1 CHROMAT_FILE:
MSMg01no340_k10.g1 PHD_FILE: MSMg01no340_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:42 2005
         (448 letters)



>mm_chr18_24017315_24018163
          Length = 849

 Score =  847 bits (438), Expect = 0.0
 Identities = 444/446 (99%), Gaps = 1/446 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagctatatcccaaataagctgtaccccttggaaatcttacatcttcaaaagatttctc 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagctatatgccaaataagctgtaccccttggaaatcttacatcttcaaaagatttctc 260

                                                                       
Query: 61  acataatttgttttt-aaaaaaatattgttagaggtgacaagatcagggtatatacttgc 119
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acataatttgtttttaaaaaaaatattgttagaggtgacaagatcagggtatatacttgc 320

                                                                       
Query: 120 ccagtctgttagatgaggtcttcctcatgtggaatcagaagaaaaagaatacatatctct 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagtctgttagatgaggtcttcctcatgtggaatcagaagaaaaagaatacatatctct 380

                                                                       
Query: 180 aagagatatttgggaattagctggattgggctgtggtaatgggtggatcctggagtgagc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagatatttgggaattagctggattgggctgtggtaatgggtggatcctggagtgagc 440

                                                                       
Query: 240 aagcaagctgccaagtgtgacttcctggcttgtctcccacacttggaaggatgaggctat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcaagctgccaagtgtgacttcctggcttgtctcccacacttggaaggatgaggctat 500

                                                                       
Query: 300 catttagtaagtgctgaaagagagctagaattgagaagacacagtgtttattttaacaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catttagtaagtgctgaaagagagctagaattgagaagacacagtgtttattttaacaaa 560

                                                                       
Query: 360 ctgagtttcaggtttctttgcagcatccaaaagatgatctgaataaccattgtgtgtgtg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgagtttcaggtttctttgcagcatccaaaagatgatctgaataaccattgtgtgtgtg 620

                                     
Query: 420 tgtgtgtgtgtgtgtgtgtgtgtgtg 445
           ||||||||||||||||||||||||||
Sbjct: 621 tgtgtgtgtgtgtgtgtgtgtgtgtg 646


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 849
Length adjustment: 10
Effective length of query: 438
Effective length of database: 839
Effective search space:   367482
Effective search space used:   367482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)