Query= MSMg01no342_a17.b1 MSMg01no342_a17.b1 CHROMAT_FILE:
MSMg01no342_a17.b1 PHD_FILE: MSMg01no342_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:27 2005
(249 letters)
>mm_chr18_77370755_77371403
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Minus
Query: 1 aaaccctgtctggaaaaactccaataaaataaaataactcaacagcagcaggtctactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaaccctgtctggaaaaactccaataaaataaaataactcaacagcagcaggtctactaa 390
Query: 61 agctcagtgcattgatattttagcccaatctggcagcaactgttggaaacaaaattggaa 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 389 agctcagtgcattgatattttagcccaatctgtcagcaactgttggaaacaaaattggaa 330
Query: 121 taattatcagaataaaagctttattcctgttctactagtgaccctttgatttgagctatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 taattatcagaataaaagctttattcctgttctactagtgaccctttgatttgagctatc 270
Query: 181 caacctcagtcagtttcttattttgcaaaataaaaacgatacctccctcagggtttgttg 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 269 caacctcagtcagtttcttattttgcaaaataaaaatgatacctccctcagggtttgttg 210
Query: 241 aaacattta 249
|||||||||
Sbjct: 209 aaacattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no342_a17.g1 MSMg01no342_a17.g1 CHROMAT_FILE:
MSMg01no342_a17.g1 PHD_FILE: MSMg01no342_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:27 2005
(417 letters)
>mm_chr18_77237072_77237888
Length = 817
Score = 725 bits (375), Expect = 0.0
Identities = 404/417 (96%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 1 catggggagatatagtgctggtgaacagcataaagacttaaatctttttttttttttttt 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 207 catggggagatatagtgctggtgaacagcataaagacctaaatcttttttttttttttt- 265
Query: 61 tttttgaatcctgcaactgatctcttgagcaccatatacaaatcttcactgttgactgga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 -----gaatcctgcaactgatctcttgagcaccatatacaaatcttcactgttgactgga 320
Query: 121 gaatgcagcaaagatttggggaagagcagagattcttctgttgccatgggggatttaatc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gaatgcagcagagatttggggaagagcagagattcttctgttgccatgggggattgaatc 380
Query: 181 tccgtgtcgctcagtgctagggaagcatcacacgataagtaagagggaggaggctagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccgtgtcgctcagtgctagggaagcatcacacgataagtaagagggaggaggctagagt 440
Query: 241 gtggctttcaggagcagaggctgcagctgcagaatcagcagcagcagcagaatctacctc 300
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 441 gtggctttcaggagcagaggctacagcagcagaatcagcagcagcagcagaatctccctc 500
Query: 301 tgagaactccctgtcactgggaggaactccctcaccttctgcgggactcagtggatggtg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 tgagaactccctgtcactgggaggaactccctcaccttctgcgtgactcagtggatggtg 560
Query: 361 agttcaaggtgatgtgtccatatttccctttcacagaatcctggctcacagcacctg 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttcaaggtgatgtgtccatatttccctttcacagaatcctggctcacagcacctg 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
