CTTATCNNNNAATTAAANATCTTTTTNNNNNNNNAANNNNNANNNNNNNN
ANAATNNNNNCNCTATACNATCACTTATTTCAAAATCCACGNATTCTCAN
CTTTACTTTCTANNGANTGTTTAATTTANACTGTCTANTGNCANATGTGT
TTGAATAATACCTCANNCATTCCNANCAACANGAATANTAANTCTAAAAT
CCCTATAAAATTAAAGCCTTCCTTTAATAAAAAAAAAAATTCCTTACCTA
AAAAATCTTCTAAAAAATCTTCTATTTCCCAAAACNTATATATTAANAAA
ATTTTCCCTTTTTTTTAAAANTCCCCACACTTTTTAAAAAAANANCCCCA
ACAATTCTTTTTTTATTCNNNNNNNACACACCCCCCCCCCCCCACCACAA
ACCACCCCCTCTTCCTCCNAAAAAATTTCTTACTTTATATTTTATTCCCC
TATTCCCCCTCTCCCATTATTATCATAAATAAAATAAAAAAANATCTCTT
TTTTCTCTTCTAAACCAAACCCACCACTCCCCCCTCCTCTCTTTTTTTTT
TTTATTTATCAAACACACATTCTCTCTACATTATTATATTTATTATCTCT
CATTCCTTANTATAATTCACCNCCACCCCTCATCCNCCTTCCTNNCCCCT
CTTTTTNNNNNNNNNNAACAATTTATATCTCACTTATACTGNNNNNNTCT
GGGNGGGGGGTTGTATTTGTTATCTTGTTTATCTTTTCTACTCTCCTTTT
CATTCTTCGCCCCTCTGCCTACCGTTCTTCTACCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTAACCATTACACAGAATTATAAAGCATTAGGTAGATAT
TAACTTCTGAGTTCAGGCTTTTGATAAACCTACACATAGAAGGTACTTCT
GAACAGATGATGGGGACTTATCTAGATTTATTGTAATCTTTGGGTGTATA
TGTGTGTTTATTTGCATGTGTATGAGTGCATACATATTCACTCACATGCA
TGCACTTCTAGAAAAGAACTTAGTTTTTATTTATGTATTTATTTATTTAG
AGATAATGTTTTGTGTGTGTTTCAGGCTGTCTTTGACTCATGGGCTCACC
TGTCATCTAATCTCAGCTTCCTAAATAGCTGGGACTATAGGTGTATGAGC
CACCATGGCCAGATCATAACCATCCTTATGTTAACTGAATGACCCTTTGC
TATGAGGAACTCTTCTCTTAGGTTTCTAGGCGTCAGTATATAGTCTGTTT
GCTATACATTTGCTAGTAAGAGGCCCAGATCAGAATCTAGCCCTCTTACT
GGAAAGGTCATGTATGTTTTGCCCGAAAATGCCTAATGCTCCAGGGAAAT
GATAATTTTGTCCCCTGTTTTTTTTAAAGAAATATCCGATTTGTACCGCC
CCCTTTTTTCATTTCTTTGCCTCTTATGTTTATTATATTATTCTATCCCC
TGTGTTTTTTTTTCCTTCCGTATTTTTTTN

Query= MSMg01no342_d05.g1 MSMg01no342_d05.g1 CHROMAT_FILE:
MSMg01no342_d05.g1 PHD_FILE: MSMg01no342_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:39 2005
         (440 letters)



>mm_chr18_45155804_45156643
          Length = 840

 Score =  804 bits (416), Expect = 0.0
 Identities = 434/440 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaccattacacagaattataaagcattaggtagatattaacttctgagttcaggctttt 60
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaccattacacagaattacaaagcattaggtagatattaacttctgagttcaggctttt 260

                                                                       
Query: 61  gataaacctacacatagaaggtacttctgaacagatgatggggacttatctagatttatt 120
           |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 261 gataaacctacacatagaaggtacttctgaacagctgatggggacttacctagatttatt 320

                                                                       
Query: 121 gtaatctttgggtgtatatgtgtgtttatttgcatgtgtatgagtgcatacatattcact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gtaatctttgggtgtatatgtgtgtttatttgcatgtgtatgagtgcatacatgttcact 380

                                                                       
Query: 181 cacatgcatgcacttctagaaaagaacttagtttttatttatgtatttatttatttagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacatgcatgcacttctagaaaagaacttagtttttatttatgtatttatttatttagag 440

                                                                       
Query: 241 ataatgttttgtgtgtgtttcaggctgtctttgactcatgggctcacctgtcatctaatc 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ataatgttttgtgtgtgtttcaggctgtctttgactcataggctcacctgtcatctaatc 500

                                                                       
Query: 301 tcagcttcctaaatagctgggactataggtgtatgagccaccatggccagatcataacca 360
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagctttctaaatagctgggactataggtgtatgagccaccatggccagatcataacca 560

                                                                       
Query: 361 tccttatgttaactgaatgaccctttgctatgaggaactcttctcttaggtttctaggcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccttatgttaactgaatgaccctttgctatgaggaactcttctcttaggtttctaggcg 620

                               
Query: 421 tcagtatatagtctgtttgc 440
           ||||||||||||||||||||
Sbjct: 621 tcagtatatagtctgtttgc 640


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)