Query= MSMg01no343_c03.b1 MSMg01no343_c03.b1 CHROMAT_FILE:
MSMg01no343_c03.b1 PHD_FILE: MSMg01no343_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:50 2005
(378 letters)
>mm_chr18_70975446_70976223
Length = 778
Score = 648 bits (335), Expect = 0.0
Identities = 364/379 (96%), Gaps = 10/379 (2%)
Strand = Plus / Minus
Query: 5 gaattcaaattgtatcacagcttgacttaaaaatctttgtttatttctgctgacagatcc 64
|||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gaattcaaattggattaaagcttgacttaaaaatctttgtttatttctgctgacagatcc 519
Query: 65 acgtctggtaggtgacagatctacatgagatacattcagaaaggacaatgctcatgttgc 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 518 acgtctggtaggtgacagatctacgtgagatacattcagaaaggacaatgctcatgttgc 459
Query: 125 atttatataccacagtgtcgtgtctgttaattggaaaataaccaaaataatccattgccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atttatataccacagtgtcgtgtctgttaattggaaaataaccaaaataatccattgccc 399
Query: 185 acattatttaggggtgggaagtgtatattatagtcatgtattctggttcttagtcaagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 acattatttaggggtgggaagtgtatattatagtcatgtattctggttcttagtcaagaa 339
Query: 245 actagcctattaggatcatttcttagttt-----actttttatcacacttgctttcagta 299
||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 338 actagcctattaggatcatttcttagtttacaaaac-----atcacacttgctttcagta 284
Query: 300 taccgtcaatagacatcctgtgctgcgtgcaaaatctctcgcagtcttcagcacattgta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 taccgtcaatagacatcctgtgctgcgtgcaaaatctctcgcagtcttcagcacattgta 224
Query: 360 ttgggattcttactgctta 378
||||||| |||||||||||
Sbjct: 223 ttgggatccttactgctta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_c03.g1 MSMg01no343_c03.g1 CHROMAT_FILE:
MSMg01no343_c03.g1 PHD_FILE: MSMg01no343_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:51 2005
(336 letters)
>mm_chr18_70765969_70766704
Length = 736
Score = 642 bits (332), Expect = 0.0
Identities = 335/336 (99%)
Strand = Plus / Plus
Query: 1 aagtgagcggctacctttaagggaaggagcccaaggagtggaagtgagatgaggtgacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtgagcggctacctttaagggaaggagcccaaggagtggaagtgagatgaggtgacct 260
Query: 61 gggcagtgggcgagcagcaggaggaggtagagcagaccagggccagggtgtgtggcgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggcagtgggcgagcagcaggaggaggtagagcagaccagggccagggtgtgtggcgggc 320
Query: 121 tcagcacaggagcaggacagctgaggcagaggaggatactgcaggcttagtgccaggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagcacaggagcaggacagctgaggcagaggaggatactgcaggcttagtgccaggcac 380
Query: 181 ctctctagtggcctgggaccaaggcttgcgggctcactgacttaggtgctaatatctagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctctagtggcctgggaccaaggcttgcgggctcactgacttaggtgctaatatctagc 440
Query: 241 tcatgatgttgaaaataagcagaaagaaatagtttcaagatagtttttaaagacctttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatgatgttgaaaataagcagaaagaaatagtttcaagatagtttttaaagacctttgc 500
Query: 301 ttagtttccttcctatactttagcatgtttctgagt 336
||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ttagtttccttcctaaactttagcatgtttctgagt 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
