Query= MSMg01no343_f10.b1 MSMg01no343_f10.b1 CHROMAT_FILE:
MSMg01no343_f10.b1 PHD_FILE: MSMg01no343_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:08 2005
(316 letters)
>mm_chr18_64697669_64698385
Length = 717
Score = 536 bits (277), Expect = e-157
Identities = 304/313 (97%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 5 ggaattctttctcttctccttcgacgtgagcccgcatattgtcaggtttgggtggtgggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctttctcttctccttcgacgtgagcccgcatattgtcaggtttgggtggtgggc 264
Query: 65 acagtgatttacctgctggttcatcctgctggcccaagccctttaaccttgaagctatct 124
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 265 acagtgatttacctgctggttcatcctgctggccgaaaccctttaaccttgaagctatct 324
Query: 125 tcttcaacggatgcacagctgtgtcttaatatgacctttccttgcttagacccttccaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcttcaacggatgcacagctgtgtcttaatatgacctttccttgcttagacccttccaag 384
Query: 185 gagccactgccattcaattcctattagaatactcattttta-ctagcagcgatatatgct 243
||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||
Sbjct: 385 gagccactgccattcaattcctattagaatactcatttttatctagtaaagatacatgct 444
Query: 244 ctttgtatttttctgctcacctaaggattacgtctgattgtaatctcatggtactgacct 303
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 445 ctttgtatttttctgctcacctaaggattatgtctgattgtaatctcatggcactgacct 504
Query: 304 acgcttactttcg 316
|||||||||||||
Sbjct: 505 acgcttactttcg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 717
Length adjustment: 9
Effective length of query: 307
Effective length of database: 708
Effective search space: 217356
Effective search space used: 217356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_f10.g1 MSMg01no343_f10.g1 CHROMAT_FILE:
MSMg01no343_f10.g1 PHD_FILE: MSMg01no343_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:08 2005
(193 letters)
>mm_chr18_64872449_64873041
Length = 593
Score = 180 bits (93), Expect = 5e-50
Identities = 120/135 (88%), Gaps = 10/135 (7%)
Strand = Plus / Minus
Query: 59 tatatatatatataggagagagagagagagagaataagcaacagcaatagtagagatagc 118
||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 406 tatatatatatat----------gagagagagaataagcaacagcaatagtagagatagc 357
Query: 119 tcagcctaccatctcgtactaggagtttagaggcacatggtttaaactagaacatgaaac 178
||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 356 ccagcctaccatctcgcactaggagttcagaggcacatgttttaaactagaacatgaaac 297
Query: 179 tatatttctttatgc 193
| |||||||||||||
Sbjct: 296 tctatttctttatgc 282
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
