Query= MSMg01no345_m17.b1 MSMg01no345_m17.b1 CHROMAT_FILE:
MSMg01no345_m17.b1 PHD_FILE: MSMg01no345_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:19 2005
(534 letters)
>mm_chr18_50585824_50586757
Length = 934
Score = 953 bits (493), Expect = 0.0
Identities = 517/525 (98%)
Strand = Plus / Plus
Query: 10 ttctctctgtttactgagtagacagtgtattcaattacccaaggaaaactctctcataaa 69
|||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 210 ttctctctgtagagtgagtagacagtgtattcaattacccaaggaaaactctcccataaa 269
Query: 70 acaaagcaagtggtaggtagattcttagctctaacccagtagactcatccagagatgatt 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 acaaagcaagtggtaggtagattcttagctctaacccagtagactcatccagagatgatt 329
Query: 130 caaattaaactggtacctttttctgtcattgttgggcaccctggaaaaccgatacaagaa 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 330 caaattaaactggtacctttttctgtcattgttgggcaccctggaaaaccgatacaagga 389
Query: 190 aactgattatgcaggtaatggagctgtaatcaaaggtctacttacagaaacatggtagac 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aactgattatgcaggtaatggagctgtaatcaaaggtctacttacagaaacatggtagac 449
Query: 250 aataaaatagtgagtccttccataaagacattcatagttaagatagagaatgaggagagt 309
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 450 aataaaatagtgagtccttccataaagacattcaaagttaagatagagaacgaggagagt 509
Query: 310 aagggacatgacttctggaaagatttagaaatagtgtttcgaagaagttcttgtggggat 369
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 510 aagggacatgacttctggaaagatttacaaatagtgtttcgaagaagttcttgtggggat 569
Query: 370 attgtgtagagaaggagaagaaactttcttaaagtcattcaaagttggagtcaggtctga 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 attgtgtagagaaggagaagaaactttcttaaagtcattcaaagttggagtcaggtctga 629
Query: 430 aggtagaaaatgggcagtcaaatcagaagaatgtctgtgcactgtggatcacaccttgtg 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aggtagaaaatgggcagtcaaatcagaagaatgtctgtgcactgtggatcacaccttgtg 689
Query: 490 agctcaatttgaggagctgagaccaaactaataggactttctaca 534
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 agctcaatttgaggagctgagaccaaactaataggactttctaca 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_m17.g1 MSMg01no345_m17.g1 CHROMAT_FILE:
MSMg01no345_m17.g1 PHD_FILE: MSMg01no345_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:19 2005
(458 letters)
>mm_chr18_50757977_50758834
Length = 858
Score = 685 bits (354), Expect = 0.0
Identities = 397/414 (95%), Gaps = 8/414 (1%)
Strand = Plus / Minus
Query: 49 gagagagagagagagagagagagagagagagagagagagagaga-g---aaagggaaagc 104
|||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 858 gagagaaagagagagagagagagagagagagagagagagagagatgtacaaagagaaagc 799
Query: 105 -aagcctgcatgtgaaacaatccagtctctaaaggctttataccataggcgtccaaatgt 163
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aaagcctacatgtgaaacaatccagtctctaaaggctttataccataggcgtccaaatgt 739
Query: 164 atgatc---taaaaagacagatgcataaatacattaacgtcatctgttctcaccaggggt 220
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 738 atgatcttataaaaagacagatgcataaatacattaacgtcatctgttctcaccaggagt 679
Query: 221 ttggagagagcactgagaggatgagctttgcctgctttctttagagtgaactcttctgta 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttggagagagcactgagaggatgagctttgcctgctttctttagagtgaactcttctgta 619
Query: 281 taatgctacccctgtgcatttgtaaaaatccctgagaagttaaagcaagagacataaacc 340
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 618 taatgctgcccctgtgcatttgtaaaaatccctgagaagttaaagcaagagacataagcc 559
Query: 341 ataatgtatacaacctaagggcaaacatttaggaaggcaaagaacaggtggtgacccaat 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ataatgtatacaacctaagggcaaacatttaggaaggcaaagaacaggtggtgacccaat 499
Query: 401 taacatttgaaatgagagagactggcatactaaagcaagagaaagtctcaataa 454
|||||||||||||||||||||||| | ||| |||||||||||||||||||||||
Sbjct: 498 taacatttgaaatgagagagactgacttacgaaagcaagagaaagtctcaataa 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
