Query= MSMg01no346_k15.b1 MSMg01no346_k15.b1 CHROMAT_FILE:
MSMg01no346_k15.b1 PHD_FILE: MSMg01no346_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:25 2005
(558 letters)
>mm_chr18_82539087_82540044
Length = 958
Score = 1056 bits (546), Expect = 0.0
Identities = 555/558 (99%)
Strand = Plus / Minus
Query: 1 ctgactgccatttttgttgtatcatcacacagactttcctccattcataaagagagaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ctgactgccatttttgttgtatcatcacacagactttcctccattcataaagagagaaat 699
Query: 61 tccactggtgttcaaagatactcattctatggatagcactgtcactcttctggctcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tccactggtgttcaaagatactcattctatggatagcactgtcactcttctggctcagtg 639
Query: 121 aatcttaatgcctttccctaaaagccctaccttcaaatacagacatgtgaggttaaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aatcttaatgcctttccctaaaagccctaccttcaaatacagacatgtgaggttaaggag 579
Query: 181 caacttggaatcgcatggcattgagtctgcaacactgaacatatcctgcttaaaggattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 caacttggaatcgcatggcattgagtctgcaacactgaacatatcctgcttaaaggattc 519
Query: 241 tataggaaagatctctcagccaccacacccacctggaatcatagctagtatgttcccgag 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 518 tataggaaagatctctcagccaccacacccacctggaatcatagctactatgttcccgag 459
Query: 301 gaggtgtgactaggctatgtttctccaggtgtccttaggggatgaaggacacctttcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaggtgtgactaggctatgtttctccaggtgtccttaggggatgaaggacacctttcaga 399
Query: 361 caacgttgcatctttctaacatcccgacgtactgcgagtaaagcaatctccaggtcagag 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caacattgcatctttctaacatcccgacgtactgcgagtaaagcaatctccaggtcagag 339
Query: 421 tgtgcccttaggaaccttcattcaagaggatggtctgagtgtgcccatgagggacacaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgtgcccttaggaaccttcattcaagaggatggtctgagtgtgcccatgagggacacaca 279
Query: 481 gtaccacttcctgtttcaggcactatgtcccgtgcacaggttaacagataccaagtcaga 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gtaccacttcctgtttcagggactatgtcccgtgcacaggttaacagataccaagtcaga 219
Query: 541 tgcagctaattctagcta 558
||||||||||||||||||
Sbjct: 218 tgcagctaattctagcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_k15.g1 MSMg01no346_k15.g1 CHROMAT_FILE:
MSMg01no346_k15.g1 PHD_FILE: MSMg01no346_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:25 2005
(493 letters)
>mm_chr18_82316761_82317653
Length = 893
Score = 897 bits (464), Expect = 0.0
Identities = 486/498 (97%), Gaps = 11/498 (2%)
Strand = Plus / Plus
Query: 1 taatttccaatcttgtaaggatccgatggacaagcttctgtaatttatgtaagctaactg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 taatttccaatcttgtaaggatccgatggacaagcttctgtcatttatgtaagctaactg 260
Query: 61 gctctttcagaaaatgttatgctgctgtattgtgagaggttattctttcaaaccaggcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctctttcagaaaatgttatgctgctgtattgtgagaggttattctttcaaaccaggcat 320
Query: 121 agccacagtggatgctgactgggtagttcccagcaaacctgaaatgctctatcaatcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccacagtggatgctgactgggtagttcccagcaaacctgaaatgctctatcaatcatg 380
Query: 181 ttggtggagcccaataagaatccagtttcccatgaggctctcccccagttcctctaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggtggagcccaataagaatccagtttcccatgaggctctcccccagttcctctaacta 440
Query: 241 ggctcacccaaggagtttttctttgttttcattgtagttgagtttcaacattctgctgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctcacccaaggagtttttctttgttttcattgtagttgagtttcaacattctgctgat 500
Query: 301 catgagttttgcttttcaattctttgaatcatcttttaaacttctgtttagtatcctatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgagttttgcttttcaattctttgaatcatcttttaaacttctgtttagtatcctatt 560
Query: 361 tttttcatttttctgatggaattcatacttaatttatgagacaggtttaagatggctgtt 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttt-catttttctgatggaattcatacttaatttatgagacaggtttaagatggctgtt 619
Query: 421 ttaaatccttgtcagataaagccagcacccattttgttggttggtt--------tacttg 472
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 620 ttaaatccttgtcagataaagccagcacccattttgttggttggttggttggtttacttg 679
Query: 473 gttt-gggggcgtttttt 489
|||| ||||| |||||||
Sbjct: 680 gttttggggg-gtttttt 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
