CTATACACTCCTATATTCGAGATCCGCGGATTCCTCTTGTCTCGCGCATA
AGGTTGTTACTANATAGGCGCATGAAGCAGCGCATCTATATGTCGTTGCT
CTGGCGTGCACACGATCGCCGAAGAACAATCACCCACGTTTGACTAGTAC
ATGCAGTTTNGTTTGTTTTTTTTTTTACCCCAANTGACCGAAAAAGCTGG
AGGCAGGCTGGGGATCACCAAAGTTCCTTAACCTGAAAAAATTTTGGGGC
CCAAGGTCCTGGGACCCCAAAAATTTCAAATCCCCCCCCACCTTGGGAAA
AAGAGGGGAAAATTTAGAGGGTTTGCTTAAACCCGGAAATGGTTTTAAAA
AAAAAGAAAATTTTTTTTTATCCCCCCCCCCCCCGGGGGGGGAAAACCTC
TCCCCCCTTGTTTTCCTCTCCCCNNAAAAATATAGGGGGCCAACAAAAAA
TTATATACCCCCCCCCCTCTGGGCGCCACCCCACCCCCCCCTCTCTTTTC
CGGGAAATACTCTGGGGGGGGGGAAAAATTTCTTTATAAANAAAACCCTC
CCCCCCCCTCGCGGGTTTATTTTCTCTTTTTTTTCTTTTCTTAATAATAC
ACACACTTTCCCTTCTTTTTTTTTTTTTCTCTCTTTTTTTCCCATTACTC
TTCTCTTTTTCTTTTTTTTTTTTCTTTTTTCTCCCCCTTTCCNTTTTNTT
TTNTTCTCTTTTTTTTTATTTTACCTTTTCCCCAACCCCGCACAGCGACC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAATTGAGATTTTTATCTATATTCACTTAGCAAAAAA
AAAAATAGTTTAATCAAATATGTGCTAAGGTGTCCTAAAACTTAGACAGT
TTGGTTCATTTTATTGGAAGTTGTTGATGTCTGGTGGTAACAGAAATGCT
ATCAATTTAGAATGTTGTTAAAACTGGGGGGCGGGGGGGGAGGTCGTTAA
GAAGACTTTCCATCTCTTCCAACAAGTTGAGTATAGCTTAGGGAGCTCAA
TACTGTTTACTAGTAAAGAGATAAAACAACGCTTAATAAAAGACATAGAC
GTGTGAAATTGTTGGACAGGGTGGCACAGGACAATACTGCCAGAAATTTG
AATAAATTTGCCATAATTAGCAAGAACTTTGAAGTCAGATGTGAATAATA
AAATCGTGTCTTTTACTAAAGTGAATTTCATACAAGAGCGAATGAAGGAT
ATAATAAATTCATAGCAAACACAGATTTACAATTTCAAAACTTACCAAAA
GTGTTTAAAATACAGGCAAGAGTAAATAATAGGAAAGGTGTTTGGAGAGA
TGCCTCAAAGGTTAAGAGCACTTGCTGTTCTCCCAGATACCCACGTTTAG
GTTCCACCGTTTAAAACTGTACTGAATGGGACCTTTTAACTCCCTGGGTA
AAGGTCCGCCCTAATATGTACTGGCGTACACACCAAAAATACTACCTTTA
AAAATCCCTT

Query= MSMg01no346_k23.g1 MSMg01no346_k23.g1 CHROMAT_FILE:
MSMg01no346_k23.g1 PHD_FILE: MSMg01no346_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:26 2005
         (450 letters)



>mm_chr18_7901762_7902617
          Length = 856

 Score =  835 bits (432), Expect = 0.0
 Identities = 448/456 (98%), Gaps = 6/456 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattgagatttttatctatattcacttagc---aaaaaaaaaaatagtttaatcaaatat 57
           ||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||
Sbjct: 201 aattgagatttttatctatattcacttagcaaaaaaaaaaaaaatactttaatcaaatat 260

                                                                       
Query: 58  gtgctaaggtgtcctaaaacttagacagtttggttcattttattggaagttgttgatgtc 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgctaaggtgtcctaaaacttagacagtttggttcattttattggaagttgttgatgtc 320

                                                                       
Query: 118 tggtggtaacagaaatgctatcaatttagaatgttgttaaaactggggggcgg---gggg 174
           |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||
Sbjct: 321 tggtggtaacagaaatgctatcaatttagaatgttgttaaaactggggggcggggtgggg 380

                                                                       
Query: 175 ggaggtcgttaagaagactttccatctcttccaacaagttgagtatagcttagggagctc 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggtcgttaagaagactttccatctcttccaacaagttgagtatagcttagggagctc 440

                                                                       
Query: 235 aatactgtttactagtaaagagataaaacaacgcttaataaaagacatagacgtgtgaaa 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatactgtttactagtaaagagataaaacaacgcttaataaaagacatagacgtgtgaaa 500

                                                                       
Query: 295 ttgttggacagggtggcacaggacaatactgccagaaatttgaataaatttgccataatt 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgttggacagggtggcacaggacaatactgccagaaatttgaataaatttgccataatt 560

                                                                       
Query: 355 agcaagaactttgaagtcagatgtgaataataaaatcgtgtcttttactaaagtgaattt 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcaagaactttgaagtcagatgtgaataataaaatcgtgtcttttactaaagtgaattt 620

                                               
Query: 415 catacaagagcgaatgaaggatataataaattcata 450
           ||||||||||||||||||||||||||||||| ||||
Sbjct: 621 catacaagagcgaatgaaggatataataaatgcata 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 856
Length adjustment: 10
Effective length of query: 440
Effective length of database: 846
Effective search space:   372240
Effective search space used:   372240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)