NNTTCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTCCACCTACTAATAATATAAATAAGACAACTTTACAGAATA
TGATATATAGGTATTTATATATCTCATGAAGATATCAAAAATGGACACTG
GAGAAAATATGGTTTCTTCAACAAATGGTGCTGCAAAAACTGGATATTGA
AAAATAAAACTAGATCCCAATTTTTCACCCTGAACAAAAAAATTAAGTCC
AAATAGATCAAATGTAAAACTCTGAAACAGAGAGAAGGAAAATACTTCAA
CATACAGGAATAGGCAAGGACTCCCTGAACAGGACCCCAGCTGCTCAGGA
AATAATCACAGGTGACAAAGGTCCTATTCTCAGGAAGCAAAAAACTTCAG
TGCATGAAAGTCATCACTGACCCAACAAACGGCCTACAGGAAGAAAGTTT
TTGCTATCCAGACATCCCACAGAAGACTGACTTTGAGAATATAGGAAGAA
CTCAAACTACTAAATGACAAGGAATCAAACAATGCAATTAGTAAATGTAC
AGATGATGTGAATAGAGAATTCTAAGAAAAGCTAACACACACACAAACTG
TCCAGCTTCACTGGTCATCAGAGAAATGTCATGTCTAAACAACAAATAGA
CTATGCCTTGTTCAGGTTCTTAATGGTCTTAATTTACCACCCCGTAACTA
TACCTTAATTCCGCTTCCCATTGTACCACTAGTTTATAAAAACTTCCCTC
TCCTGTGCAAATTTTATTTTTCCTTCCTTTT

NNCCCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTATTCAGATGACACTAA
AACCCTTACATGGTGGCACATGCCAGTGTCTAGGGAGCTGAGGCAGTAGG
ATCAAGACATCAGGCCAGCTGGGCTACAGAGTGACTTCCAGGCTAGCCTG
AGCTATATAAGGAGACCCTGTTTCAAACAAATCAAAACAAGACACAAAAG
ACAGTAAATAACTCTTCCTGTAAAGATAGCCTAATGAGACTTCATCTGTG
CACTTTGCGCATAGTTTTGTTTTCCCCTTGAATATGTATCCCCAAAAAAA
AAGCATATAAAACTCGTTTTTAACGAGGGCTTTGAGTAACTCAAAGGAAT
TTTCTAGAAACCAGTCCATGCTATTACATTTCTCTGGGGAGAAGCCAGCC
ATATCCCGTTACAGATCAACTCTGAGGATGAGATGAGAAACGGACAAGAA
ACTCTACTCCCAGTTAACGTCCCCAAATCATAAACCACGGTGGCTGCTCT
AATCTGCTAGATTATCGATCATCTCTAACTAGCCCTTACACAAATGCTAA
TTCAGCCCTGATGAGATCATCCAGACCCTTCGGAACTGAGGAGCCTGGCA
TCTCCAGGGCCAAGACAATTGCCAGACATGTTCCTGGGGGAAGAAACCCC
CCTGAAGTAAACCTTCCCCGCCCCTCTTTTGTTTTCTAGGGGAGTGAGAA
AGGCCTATTACCAGCCTG

Query= MSMg01no347_p24.g1 MSMg01no347_p24.g1 CHROMAT_FILE:
MSMg01no347_p24.g1 PHD_FILE: MSMg01no347_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:09 2005
         (501 letters)



>mm_chr18_75127492_75128394
          Length = 903

 Score =  891 bits (461), Expect = 0.0
 Identities = 492/505 (97%), Gaps = 6/505 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttattcagatgacactaaaacccttacatggtggcacatgccagtgtctagggagctg 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttattcagatgacgctaaaacccttacatggtggcacatgccagtgtctagggagctg 260

                                                                       
Query: 61  aggcagtaggatcaagacatcaggccagctgggctacagagtgacttccaggctagcctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcagtaggatcaagacatcaggccagctgggctacagagtgacttccaggctagcctg 320

                                                                       
Query: 121 agctatataaggagaccctgtttcaaacaaatcaaaacaagacacaaaagacagtaaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctatataaggagaccctgtttcaaacaaatcaaaacaagacacaaaagacagtaaata 380

                                                                       
Query: 181 actcttcctgtaaagatagcctaatgagacttcatctgtgcactttgcgcatagttttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actcttcctgtaaagatagcctaatgagacttcatctgtgcactttgcgcatagttttgt 440

                                                                       
Query: 241 tttccccttgaatatgtatccccaaaaaaaaa----gcatataaaactcgtttttaacga 296
           |||||||||||||||||||||  |||||||||    |||||||||||| |||||||||||
Sbjct: 441 tttccccttgaatatgtatcc--aaaaaaaaaaaaagcatataaaacttgtttttaacga 498

                                                                       
Query: 297 gggctttgagtaactcaaaggaattttctagaaaccagtccatgctattacatttctctg 356
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 499 gggctttgagtaactcaaaggaattttctagaaaccagtccatgctatcacatttctctg 558

                                                                       
Query: 357 gggagaagccagccatatcccgttacagatcaactctgaggatgagatgagaaacggaca 416
           ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 559 gggagaagccagccatatcccattacagatcaactctgcggatgagatgagaaacggaca 618

                                                                       
Query: 417 agaaactctactcccagttaacgtccccaaatcataaaccacggtggctgctctaatctg 476
           |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 619 agaagctctactcccagttaacatccccaaatcataaaccacggtggctgctctaatctg 678

                                    
Query: 477 ctagattatcgatcatctctaacta 501
           |||||||||||||||||||||||||
Sbjct: 679 ctagattatcgatcatctctaacta 703


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 903
Length adjustment: 10
Effective length of query: 491
Effective length of database: 893
Effective search space:   438463
Effective search space used:   438463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)