Query= MSMg01no348_f23.b1 MSMg01no348_f23.b1 CHROMAT_FILE:
MSMg01no348_f23.b1 PHD_FILE: MSMg01no348_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:38 2005
(515 letters)
>mm_chr18_38862328_38863242
Length = 915
Score = 973 bits (503), Expect = 0.0
Identities = 509/511 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtgttctcgatgacatgagcagagatgggtgagtgtctttctctggttccacc 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgctctcgatgacatgagcagagatgggtgagtgtctttctctggttccacc 264
Query: 65 gagctctcgatattgggtctttactctttaggtcacacaacattgttgacactgccgtgt 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 gagctctcgatattgggtctttactctttaggtcacacagcattgttgacactgccgtgt 324
Query: 125 tggctgagatatcgcagagctctgtgaaccagatggttctgtgccccgctcacaccctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggctgagatatcgcagagctctgtgaaccagatggttctgtgccccgctcacaccctct 384
Query: 185 gaaggacaggtaaagttgctgttaattagggggagagcagagagttgccagggaggctgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaggacaggtaaagttgctgttaattagggggagagcagagagttgccagggaggctgc 444
Query: 245 ctgaatttccccagatgaagttgctttacagcgagggactgagaaaggggtctgcagctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgaatttccccagatgaagttgctttacagcgagggactgagaaaggggtctgcagctg 504
Query: 305 atcctcctctcaatctcacaagtcctgcacaaagtagcaatgagggaaaggggttgaact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcctcctctcaatctcacaagtcctgcacaaagtagcaatgagggaaaggggttgaact 564
Query: 365 acttaggaggaagcgcatcttgaaggctattgccttgctcagagagattaagtccggaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acttaggaggaagcgcatcttgaaggctattgccttgctcagagagattaagtccggaag 624
Query: 425 tctcctgctagctctctgaatctgcaggagggtaagtcgggggacttaattacccaagtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctcctgctagctctctgaatctgcaggagggtaagtcgggggacttaattacccaagtg 684
Query: 485 gcctgtgggcaggcctggcagccatcctgtg 515
|||||||||||||||||||||||||||||||
Sbjct: 685 gcctgtgggcaggcctggcagccatcctgtg 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_f23.g1 MSMg01no348_f23.g1 CHROMAT_FILE:
MSMg01no348_f23.g1 PHD_FILE: MSMg01no348_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:38 2005
(138 letters)
>mm_chr18_39051407_39051948
Length = 542
Score = 255 bits (132), Expect = 6e-73
Identities = 138/142 (97%), Gaps = 4/142 (2%)
Strand = Plus / Minus
Query: 1 actgttatgacaataatggcagagagggaaattttgataggtcagatcctgacaaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 actgttatgacaataatggcagagagggaaattttgataggtcagatcctgacaaaatgc 283
Query: 61 ctacgaacagtcagagacaggaagtgtggccacagctgcact----ggggggggggggct 116
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 282 ctacgaacagtcagagacaggaagtgtggccacagctgcactggggggggggggggggct 223
Query: 117 ttgcaagccctgcactgccatc 138
||||||||||||||||||||||
Sbjct: 222 ttgcaagccctgcactgccatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 542
Length adjustment: 8
Effective length of query: 130
Effective length of database: 534
Effective search space: 69420
Effective search space used: 69420
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
