XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTCTACATGACAATCACCAGTTTTGCCAGCACCATTTGTTGAAAATGCTG
TCTTTTTTACACTGGATGGTTTTAGGTCCCTGGTCAAAAATCAAGTGACC
ATAGGTGTGTGGGTTCTTTTCTGGGTCTTCAATTCTATTCCATTGGTTTA
CTTGTCTGTCGCTATACCAATACCATGCAGTTTTTATCACAATTGCTCTG
TAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATC
ATTGAGAAGAGTTTTTGCTATCCTAGATTTTTTGTTTTTCCAGATAAATT
TGCAGATTGCCCTTTCTAATTCTTTGAAGAATTGAGTTGGAATTTTCATG
GGGATTGCATTGAATCTGTAGATTGCTTTTGGCAAGATAGCCATTTTTAC
TATACTGATCCTACCAATCCATGAGCATGGGAGATCTTTCCATCTTCTGA
GATCATCTTTAATTTCCTTCTTCAGAGACTTGAAGTTCTTATCATACAGA
TCTTTCACTTCCTTAGTTAGAGTCATGCCAAGGTATTTTATATTATTTGT
GACTCTTGAGAAAGGGTTTATTTCCCTAATTTCTTTCTCAGCCTGTTTAT
TCTTTGTGCAGAGAAAGGCTATTGACTTGTTTGAGGTAATTTATATCCAT
CTTAATCACTGAAGCTGTTTATCACCTTATGAGTTCTCGGGGGGA

CCATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGCCTAACCAATCTAGTTGAATTA
CCAAGCTAGGAGCAATGCATGACTACATCCTATTGCCCAGCCCCCCTTTT
CCATGTATACAGAGCATGTCCCAGCCAAGAAATGGTGCCACCTACAGCAG
AGAGGGGTTTTCACTCCGTTGATGCAATGAAGATAATCTTCCATAGGCAT
CTACAAAAGCCCAACTGGTGATTCTAGAATCTGTCAAGCTGACAATGAAT
TCTAACCATTACACAGAATTATAAAGCATTAGGTAGATATTAACTTCTGA
GTTCAGGCTTTTGATAAACCTACACATAGAAGGTACTTCTGAACAGATGA
TGGGGACTTATCTAGATTTATTGTAATCTTTGGGTGTATATGTGTGTTTA
TTTGCATGTGTATGAGTGCATACATATTCACTCACATGCATGCACTTCTA
GAAAAGAACTTAGTTTTTATTTATGTATTTATTTATTTAGAGATAATGTT
TTGTGTGTGTTTCAGGCTGTCTTTGACTCATGGGCTCACCTGTCATCTAA
TCTCAGCTTCCTAAATAGCTGGGACTATAGGTGTATGAGCCACCATGGCC
AGATCATAACCATCCTTATGTTAACTGAATGACCCTTTTGCTATGAGGAA
CTCTTCTCTTAAGTTTCTTAGGGGCAGTATATAGACTGTTTGCTATAACT
TTGTTAGTAAAA

Query= MSMg01no349_l03.g1 MSMg01no349_l03.g1 CHROMAT_FILE:
MSMg01no349_l03.g1 PHD_FILE: MSMg01no349_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:23 2005
         (550 letters)



>mm_chr18_45155576_45156525
          Length = 950

 Score =  988 bits (511), Expect = 0.0
 Identities = 541/551 (98%), Gaps = 1/551 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgcctaaccaatctagttgaattaccaagctaggagcaatgcatgactacatcctatt 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 actgcctaaccaacctagttgaattaccaagctaggagcaatgcatgactacatcctatt 259

                                                                       
Query: 61  gcccag-ccccccttttccatgtatacagagcatgtcccagccaagaaatggtgccacct 119
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 260 gcccagtccccccttttccatgtatacagagcacgtcccagccaagaaatggtgccacct 319

                                                                       
Query: 120 acagcagagaggggttttcactccgttgatgcaatgaagataatcttccataggcatcta 179
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 acagcagagaggggttttcactctgttgatgcaatgaagataatcttccataggcatcta 379

                                                                       
Query: 180 caaaagcccaactggtgattctagaatctgtcaagctgacaatgaattctaaccattaca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaaagcccaactggtgattctagaatctgtcaagctgacaatgaattctaaccattaca 439

                                                                       
Query: 240 cagaattataaagcattaggtagatattaacttctgagttcaggcttttgataaacctac 299
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagaattacaaagcattaggtagatattaacttctgagttcaggcttttgataaacctac 499

                                                                       
Query: 300 acatagaaggtacttctgaacagatgatggggacttatctagatttattgtaatctttgg 359
           ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 500 acatagaaggtacttctgaacagctgatggggacttacctagatttattgtaatctttgg 559

                                                                       
Query: 360 gtgtatatgtgtgtttatttgcatgtgtatgagtgcatacatattcactcacatgcatgc 419
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 gtgtatatgtgtgtttatttgcatgtgtatgagtgcatacatgttcactcacatgcatgc 619

                                                                       
Query: 420 acttctagaaaagaacttagtttttatttatgtatttatttatttagagataatgttttg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acttctagaaaagaacttagtttttatttatgtatttatttatttagagataatgttttg 679

                                                                       
Query: 480 tgtgtgtttcaggctgtctttgactcatgggctcacctgtcatctaatctcagcttccta 539
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 680 tgtgtgtttcaggctgtctttgactcataggctcacctgtcatctaatctcagctttcta 739

                      
Query: 540 aatagctggga 550
           |||||||||||
Sbjct: 740 aatagctggga 750


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)