XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TTGTTTAGCTCTGTACCTCATCTTTTAAATGGAATTATTTGAATTTCTGG
AGTCCAGCTTTTTGAGCTCTTTGTATATATTGGATATTAGTCCCCTATCA
GATTTAGGATTGGTAAAAATTCTTTCACAATCTGTTGGTAGCCTTTTTGT
CTCATTGACAGTGTCCTTTTCCTTACAGAAGCTTTGCTATTTTATGAGGT
CCCATTTGTCAATTCTTGATCTTACAGCACAATCCATTGCTGTTCTGTTT
AGGAATTTTTCCCCTGTGCCCATATCTTCAAGACTTTTCCCCACTCTTTC
CTATATTAATTTCAGTGTCTCTGTCTGGTTTTATGTGGAGGTCTTTGATT
CACTTAGACTTGAGATTTGTACAAGGAGATAAGAATGGATCAATTCACAT
TCTTCTACATGATGACCGCCAGTTTTGCCAGCACCATTTGTTGAAAATGC
TGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGA
CCATAGGTGGGTGGATTCATTTCTGGGTCTTAAATTATATTCCATTGATC
TACCTATCTGTCACTGTACCAGTACCACACAGTTCTTATCACAATTGTTC
TGTAGTACAGCTTAATGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTA
TTGTTGAGAATAGTTTGGCTATACTACATTT

GAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGCAGTAGCAAAAGAAGCAGGAAGA
ACCAGCAGCAGTGAGTGGAGCATCAGGGGAGCAGCATCAGGGGAGCAGCA
GGAACCACATCCTCTCTCTGGGTCCCTCGCATTTATACTGTCTCCAGAGT
CCCCTGAATTCAACTATCTGCAGCTGATAAAAATCATGTCCCACTAGAGC
ACAAGGCCACCAAAGTTAATGGCTGTGGACAAACTGAAACAATCTCTTCT
CCCACACATGGGATTAGAACAAAAACAGATTCCCCTAACATAACTGGATT
TTTAAAGAAACCAAAATTCTCACTACAAAAAGATGCTTAATGGGAAATCC
ATTCCTCACCCTCATGAGAACTTCACATGATTTTACGCCATGACCATCTC
AGCACTGGAAGACTGGAGAAACTGTGAACACAATTTCCTAGGCACCAAGA
CATGAAAAAAATCTGCCAAGGCTAAGAGCATTCTCCATACTTCTGTGTAG
TCCTTGGTTCAAGACCTTGTCTACTACTGATGGCTTAATTGGCCCTTCAT
TGTATTAACATGAAGCCAGTATGGAAGACACAGATGAAGTGCAGACCACA
GTTTAGAATAGCTTTTCTAAATCATGCACTAGGGTTGTCTGGTCAGACAA
ATGATTGTATAATCTTTAGTCACTCCTGTTTTTCCAGCCACAGGTTCTG

Query= MSMg01no349_o08.g1 MSMg01no349_o08.g1 CHROMAT_FILE:
MSMg01no349_o08.g1 PHD_FILE: MSMg01no349_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:39 2005
         (671 letters)



>mm_chr18_41744776_41745846
          Length = 1071

 Score = 1237 bits (640), Expect = 0.0
 Identities = 667/682 (97%), Gaps = 11/682 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcagtagcaaaagaagcaggaagaaccagcagcagtgagtggagcatcaggggagcagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagtagcaaaagaagcaggaagaaccagcagcagtgagtggagcatcaggggagcagc 260

                                                                       
Query: 61  atcaggggagcagcaggaaccacatcctctctctgggtccctcgcatttatactgtctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaggggagcagcaggaaccacatcctctctctgggtccctcgcatttatactgtctcc 320

                                                                       
Query: 121 agagtcccctgaattcaactatctgcagctgataaaaatcatgtcccactagagcacaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtcccctgaattcaactatctgcagctgataaaaatcatgtcccactagagcacaag 380

                                                                       
Query: 181 gccaccaaagttaatggctgtggacaaactgaaacaatctcttctcccacacatgggatt 240
           ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||
Sbjct: 381 gccaccaaagttaatggctgtggacaaactgaagcaatctctaatcccacacatgggatt 440

                                                                       
Query: 241 agaacaaaaacagattcccctaacataactggatttttaaagaaaccaaaattctcacta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaacaaaaacagattcccctaacataactggatttttaaagaaaccaaaattctcacta 500

                                                                       
Query: 301 caaaaagatgcttaatgggaaatccattcctcaccctcatgagaacttcacatgatttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaaagatgcttaatgggaaatccattcctcaccctcatgagaacttcacatgatttta 560

                                                                       
Query: 361 cgccatgaccatctcagcactggaagactggagaaactgtgaacacaatttcctaggcac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgccatgaccatctcagcactggaagactggagaaactgtgaacacaatttcctaggcac 620

                                                                       
Query: 421 caagacatgaaaaaaatctgccaaggctaagagcattctccatacttctgtgtagtcctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagacatgaaaaaaatctgccaaggctaagagcattctccatacttctgtgtagtcctt 680

                                                                       
Query: 481 ggttcaagaccttgtctactactgatggcttaattggcccttcattgtattaacatgaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggttcaagaccttgtctactactgatggcttaattggcccttcattgtattaacatgaag 740

                                                                       
Query: 541 ccagtatggaagacacagatgaagtgcagaccacagtttagaatagcttttctaaatcat 600
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 741 ccagtatggaagacacagatgaagtgcagaccacagtttagaaaagcttttctaaatcat 800

                                                                       
Query: 601 gcactagggttgtctggtcaga----------caaa-tgattgtataatctttagtcact 649
           ||||||||||||||||||||||          |||| |||||||||||||||||||||||
Sbjct: 801 gcactagggttgtctggtcagagttcaccttccaaaatgattgtataatctttagtcact 860

                                 
Query: 650 cctgtttttccagccacaggtt 671
           ||||||||||||||||||||||
Sbjct: 861 cctgtttttccagccacaggtt 882


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)