Query= MSMg01no350_f11.b1 MSMg01no350_f11.b1 CHROMAT_FILE:
MSMg01no350_f11.b1 PHD_FILE: MSMg01no350_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:14 2005
(474 letters)
>mm_chr18_68887674_68888546
Length = 873
Score = 855 bits (442), Expect = 0.0
Identities = 463/470 (98%), Gaps = 1/470 (0%)
Strand = Plus / Plus
Query: 5 gaattctagttctaccaaacttgtaattatgcaagagtataattactagctttagaattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagttctaccaaacttgtaattatgcaagagtataattactagctttagaattt 264
Query: 65 tgatcacagggtatcttccaaactttgaattttgttgggggaggggagtaccttttcatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatcacagggtatcttccaaactttgaattttgttgggggaggggagtaccttttcatt 324
Query: 125 tggtatcttcatgttgtatggaatctgaaataacattgtacaggcaatgagctagaggcc 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 tggtatcttcatgttgtatggaatctgaaataacattatacaggcaatgagctagaggcc 384
Query: 185 attttagcttgggctgctgtggaaatctctcccctgaaggactggtatactactcacctt 244
| ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 gtcttagcttgggctgatatggaaatctctcccctgaagggctggtatactactcacctt 444
Query: 245 cttatataacaaaaatcagggggggaggattgtagagtggtccagctgcggtccttaatc 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 cttatataacaaaaatcaggggggg-ggattgtagagtggtccagctgcggtccttaatc 503
Query: 305 atgtgctttggcaaagaagccctcctatcacatctctgcttagtaacagggtgcagaatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atgtgctttggcaaagaagccctcctatcacatctctgcttagtaacagggtgcagaatc 563
Query: 365 aatacaactcagcatgggtgctgggtctatgccatgagtccctaaggaaaaggaggataa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatacaactcagcatgggtgctgggtctatgccatgagtccctaaggaaaaggaggataa 623
Query: 425 ctgttcactggtttatttgtacagtgttttggatagtgactgatatatat 474
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgttcactggtttatttgtacagtgttttggatagtgactgatatatat 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 873
Length adjustment: 10
Effective length of query: 464
Effective length of database: 863
Effective search space: 400432
Effective search space used: 400432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_f11.g1 MSMg01no350_f11.g1 CHROMAT_FILE:
MSMg01no350_f11.g1 PHD_FILE: MSMg01no350_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:14 2005
(414 letters)
>mm_chr18_68979591_68980404
Length = 814
Score = 746 bits (386), Expect = 0.0
Identities = 407/414 (98%)
Strand = Plus / Minus
Query: 1 cattcttagctgccttttgaggctctggaaaaatcaaactttcgtaggtaaaagtcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cattcttagctgccttttgaggctctggaaaaatcaaactttcgtaggtaaaagtcagga 555
Query: 61 agcagtttaagcctgtctttccctgctggcaccaggatctgaactgttatcctgcatgaa 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 554 agcagtttaagcctgtctttccctgctggcaccaggatctaaactgttatcctgcatgaa 495
Query: 121 acagaggaagtgacagttgtggggcataattcttgtcagaagtccactgggatgggaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 acagaggaagtgacagttgtggggcataattcttgtcagaagtccactgggatgggaggg 435
Query: 181 gtcttctatctgtttctgtgtcttattcaaatatcaagcttataaatatcactcttacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtcttctatctgtttctgtgtcttattcaaatatcaagcttataaatatcactcttacct 375
Query: 241 ctaaggcagggatcagcgacaaaatagcgaagaaaatttccaacaaaaactcctttctga 300
||||||||||| |||||||||| ||||| |||||| |||||||| ||| |||||||||||
Sbjct: 374 ctaaggcaggggtcagcgacaagatagctaagaaagtttccaacgaaatctcctttctga 315
Query: 301 agatacttttctgccattgaagtggatgattatgaagcagattacaccgagagtgtcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agatacttttctgccattgaagtggatgattatgaagcagattacaccgagagtgtcttt 255
Query: 361 tgccttgtggaagaagaacaacaaaaaaaaatcatatttaagatttcccccttc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgccttgtggaagaagaacaacaaaaaaaaatcatatttaagatttcccccttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
