Query= MSMg01no350_h21.b1 MSMg01no350_h21.b1 CHROMAT_FILE:
MSMg01no350_h21.b1 PHD_FILE: MSMg01no350_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:26 2005
(369 letters)
>mm_chr18_71101540_71102309
Length = 770
Score = 578 bits (299), Expect = e-169
Identities = 349/367 (95%), Gaps = 6/367 (1%)
Strand = Plus / Plus
Query: 5 gaattcatttgatattcgtacgagttgtttaataaagaaagagggtggggtttt---tca 61
|||||||||||| ||| |||||||||||||||||||||||||||||||| |||| | |
Sbjct: 205 gaattcatttgagatt-gtacgagttgtttaataaagaaagagggtgggtttttttatta 263
Query: 62 ttattatttaaaattgaagacccatggaatccaagttactgcctcattttgtgaaatgaa 121
||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 264 ttattattttaaattgaagacccatggaatccaagttattgcctcattttgtgaaatgga 323
Query: 122 tatttgtaacctttaatgaaataacgtaaaagaatcagtatctctttaaggaaatagcaa 181
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 324 tatttgtaacctttaatgaaataacgtaaaagaattagtatctctttaagaaaatagcaa 383
Query: 182 ggtggaagtgagcagatttgttctaatgttcacctctaatgaggtgagctctaagtgttt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtggaagtgagcagatttgttctaatgttcacctctaatgaggtgagctctaagtgttt 443
Query: 242 tttcccatcttgttttcagtgctagcatgctatattacctgtctctgtacaggtatatgg 301
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tt-cccatcttgttttcagtgctagcatgctatattacctgtctctgtacaggtatatgg 502
Query: 302 gagcataccttgccgatatgacgaatgattagccactttgagaggttgcttggatgattg 361
||||||||||||| ||||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 503 gagcataccttgctgatatgacgaatgatcagccactttgagagcttgcttggataattg 562
Query: 362 ccttttt 368
| |||||
Sbjct: 563 c-ttttt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 770
Length adjustment: 9
Effective length of query: 360
Effective length of database: 761
Effective search space: 273960
Effective search space used: 273960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_h21.g1 MSMg01no350_h21.g1 CHROMAT_FILE:
MSMg01no350_h21.g1 PHD_FILE: MSMg01no350_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:26 2005
(322 letters)
>mm_chr18_71314720_71315440
Length = 721
Score = 572 bits (296), Expect = e-168
Identities = 314/320 (98%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 1 ttttgctgaatttcctataaatatccatttaagacattctttgtccattctccctaccaa 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttttgctgaatttcctataaatacccatttaagacattctttgtccattctccctaccaa 431
Query: 61 tgttcttcataccctcttgatttctcttcatgagtcgcaagttctatgaacaataacaac 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 tgttcttcataccctcttgatttctcttcatgagt-gcaagttctatgaacaataacaac 372
Query: 121 aaaatattataaaaatctgaatctccctcctcatgtaaacatgatattcttgtcctgcat 180
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaaatgttatcaaaatctgaatctccctcctcatgtaaacatgatattcttgtcctgcat 312
Query: 181 gtgtcctagtagagcaacagagaagtatgaacttgatgccaaagaagtaaataatattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtgtcctagtagagcaacagagaagtatgaacttgatgccaaagaagtaaataatattca 252
Query: 241 ccattgctaacgtttgaaatctgaagttctatttgattcattagatacagatgtgtgtgt 300
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcattgttaacgtttgaaatctgaagttctatttgattcattagatacagatgtgtgtgt 192
Query: 301 gtgtgtgtgtgtgtgtgtgt 320
||||||||||||||||||||
Sbjct: 191 gtgtgtgtgtgtgtgtgtgt 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 721
Length adjustment: 9
Effective length of query: 313
Effective length of database: 712
Effective search space: 222856
Effective search space used: 222856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
