NNNNNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGT
TGTTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGAT
ATTAGTCCCCTATCTGATTTGGGATAGGTAAAGATCCTTTTCCCAATCTG
TTGGTGACCTTTCTGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTT
TGCAATTTTATGAGGTCCCATTTATCGATTCTTGATTTTACAGCACAAGC
CATTGATGTTCTATTCAGGAATTTTTCCCCTGTACCAATATCTTCGAGGC
TTTTCCCTACTTTCTTTTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGG
AGTTCCTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGAAATGG
ATCAATTCGCAATCTTCTACATGATAACAGCCAGTTGTGCCAGCACCATA
TGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCA
AAGATCAAGTGACCATAGGTGTGTGGATTCATCTCTGGGTCTTCAATTCT
GTTCCATTGGTCTAGTTGTCTGTCAGTATACCAGTACCATGCAGTTTTGA
TCACAATTGCTCTATAGTACAGTTTTAGGTCCGGCATGGTGATTCCACCA
GAGGTCTTTTATCCTTGAAAAGAGTTT

NNNTTTTTCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTGCAGTGAGTCG
GACAACTAGAAACAAGCCAGGCAACGACTTACTCAAATGGAATTTGGCTT
ATTTGTGGGTTTAAAATATCTGTTTTTCCTCTGTCCCATTATCCCCTGTA
ATCAGATCAGCCATGGTAGGAGGCAGACAATTAGGACAGAACATTAGAAA
GCACACTGACAAAGCAGGCAGCAACTGATGGGTGGGGAGGTGTGGTGCTG
GCAATTTGGCTTTGGGGGACAGAAGCTGATTTTTAAAAAGATTTATTTTT
ATTACCTTTAAATTATGTGTGTATCTGCATGGGGGTATGTGCACATGAGT
GCAGGTACCCATAGAATTCAGAAGAGGGTATTAGATGCCCTAGAGCTGGA
GTTACAGGCAATCCGAAACTGCCAGGCATGAGTGCTAGAAATAAAATTCT
GCTCCTGTACTAGAGGAGCCTTCACTCCAGCCCCCACAGGATAATTGTTT
TTTTTTTATTATTATTGCAGGTATTAGAAGAGAATACTGAATAATGTTTC
CAGATTTAATGAATTATGTAATGAAAGTGCATACAATGTGACTGCTATGA
TTTATATAATAACAATTACAGTATGAGTTCCTATTGACAATTAGCTTTTA
ACAGTAGAACAAAAACCGAAGTCCAGGTTTGCTTTTCN

Query= MSMg01no351_a16.g1 MSMg01no351_a16.g1 CHROMAT_FILE:
MSMg01no351_a16.g1 PHD_FILE: MSMg01no351_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:12 2005
         (486 letters)



>mm_chr18_23612513_23613398
          Length = 886

 Score =  857 bits (443), Expect = 0.0
 Identities = 452/455 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctctgcagtgagtcggacaactagaaacaagccaggcaacgacttactcaaatggaattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctctgcagtgagtcggacaactagaaacaagccaggcaacgacttactcaaatggaattt 397

                                                                       
Query: 61  ggcttatttgtgggtttaaaatatctgtttttcctctgtcccattatcccctgtaatcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggcttatttgtgggtttaaaatatctgtttttcctctgtcccattatcccctgtaatcag 337

                                                                       
Query: 121 atcagccatggtaggaggcagacaattaggacagaacattagaaagcacactgacaaagc 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 336 atcagccatggtaggaggcagacaattaggacagaacattagaaagcacactgacaaaac 277

                                                                       
Query: 181 aggcagcaactgatgggtggggaggtgtggtgctggcaatttggctttgggggacagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aggcagcaactgatgggtggggaggtgtggtgctggcaatttggctttgggggacagaag 217

                                                                       
Query: 241 ctgatttttaaaaagatttatttttattacctttaaattatgtgtgtatctgcatggggg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 216 ctgatttttaaaaagatttatttttattacctttaaattatgtgtgtatctgcatgaggg 157

                                                                       
Query: 301 tatgtgcacatgagtgcaggtacccatagaattcagaagagggtattagatgccctagag 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 156 tatgtgcacatgagtgcaggtacccatagaattcagaagagggtattagatgtcctagag 97

                                                                       
Query: 361 ctggagttacaggcaatccgaaactgccaggcatgagtgctagaaataaaattctgctcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  ctggagttacaggcaatccgaaactgccaggcatgagtgctagaaataaaattctgctcc 37

                                              
Query: 421 tgtactagaggagccttcactccagcccccacagg 455
           |||||||||||||||||||||||||||||||||||
Sbjct: 36  tgtactagaggagccttcactccagcccccacagg 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)