Query= MSMg01no352_e01.b1 MSMg01no352_e01.b1 CHROMAT_FILE:
MSMg01no352_e01.b1 PHD_FILE: MSMg01no352_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:43 2005
(455 letters)
>mm_chr18_74280286_74281140
Length = 855
Score = 837 bits (433), Expect = 0.0
Identities = 448/453 (98%), Gaps = 2/453 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaatatctccttctaatagctttagtcttgaaagtgggtttgctctgaggtca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ggaattccaatatctccttctaatagctttagtcttgaaagtgggtttgctctgaggtca 596
Query: 64 cacacctgagctgccacacttgaagatgagacttttcctagaggaactctgggcaaagtg 123
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 595 cacacctgagctgtcacacttgaagctgagacttttcctagaggaactctgggcaaagtg 536
Query: 124 tcaccattggccaatatgccaacaatgtgcaaattttacaaaataatttaccaagacatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tcaccattggccaatatgccaacaatgtgcaaattttacaaaataatttaccaagacatc 476
Query: 184 atacatccc-aggtgtctactaggtgagtgggtggttctggcatctgtgtaattgggagt 242
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atacatcccga-gtgtctactaggtgagtgggtggttctggcatctgtgtaattgggagt 417
Query: 243 ctggggaacatgatctgggcaactggaatccagaaatcctggaggaaaatggagctaggg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctggggaacatgatctgggcaactggaatccagaaatcctggaggaaaatggagctaggg 357
Query: 303 tgtaggaggaagggcaagaaggcctcttccaaggtcttcctgctgcatgggccagagcat 362
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 356 tgtaggaggaagggcaagaaggcctcttccaaggccttcctgctgcatgggccagagcat 297
Query: 363 gtcaccattaacacacgaatccgctcagtcatgggactcacctgtaggactgccagcttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtcaccattaacacacgaatccgctcagtcatgggactcacctgtaggactgccagcttg 237
Query: 423 ttaatgtaccccaaattatgacgtcattggcgt 455
|||||||||||||||||||||||||||||||||
Sbjct: 236 ttaatgtaccccaaattatgacgtcattggcgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_e01.g1 MSMg01no352_e01.g1 CHROMAT_FILE:
MSMg01no352_e01.g1 PHD_FILE: MSMg01no352_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:44 2005
(452 letters)
>mm_chr18_74247830_74248681
Length = 852
Score = 781 bits (404), Expect = 0.0
Identities = 443/460 (96%), Gaps = 10/460 (2%)
Strand = Plus / Plus
Query: 1 agggagtggatcgtccaccccatccaactcaatcttgcagacacttcag---taca---- 53
||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 193 agggagtggatcgtccaccccatccaactcaatcttgcagacacttcagtgcttcagtgc 252
Query: 54 -tgtaggtgctccaagtcaccatccctggtaggggacagagaaacattaagttctg-ata 111
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | |
Sbjct: 253 gtgtaggtgatccaagtcaccacccctggtaggggacagagaaacattaagttctgga-a 311
Query: 112 attcctataattagagaggggtgaagaggggatgaagaaagtgatagatacttgtcacca 171
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 attcctatcattagagaggggtgaagaggggatgaagaaagtgatagatacttgtcacca 371
Query: 172 tctaacattgcaatgagatgtgataattggtcagatcttgggctgaagaaatttctcagc 231
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 372 tctaacattgcaatgagatgtgataattggtcagatcttgggctgaagagatttctcagc 431
Query: 232 cgttagagcactggctgctcttgcagttcccagcacctacatgacaggtaacagcagcag 291
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 432 cgttagagcactggctgctcttgcagttcccagcacccacatgacaggtaacagcagcag 491
Query: 292 atttcaactttcctaatgctgcaaccctttattacagttccccatgttgtggtgaccccc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atttcaactttcctaatgctgcaaccctttattacagttccccatgttgtggtgaccccc 551
Query: 352 aaccatacaattattttgttatgacttcataactgtaattttgctactgtgatctaagaa 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaccatacaattattttgttatgacttcataactgtaattttgctactgtgatctaagaa 611
Query: 412 atgagaaacaggctgggtttgatatcagctcagagaatta 451
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 612 atgagaaacaggttgggtttgatatcagctcagagaatta 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
