Query= MSMg01no352_k24.b1 MSMg01no352_k24.b1 CHROMAT_FILE:
MSMg01no352_k24.b1 PHD_FILE: MSMg01no352_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:19 2005
(324 letters)
>mm_chr18_35491356_35492079
Length = 724
Score = 503 bits (260), Expect = e-147
Identities = 301/324 (92%), Gaps = 15/324 (4%)
Strand = Plus / Plus
Query: 1 tcatgggctggcgagatagctcagcgggtaagagcactgactgctcctcccaaggtcctg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tcatgggctggcgagagagctcagcgggtaagagcactgactgctcctcccaaggtcctg 275
Query: 61 agttcaaatcccagcaaccacatggtagctcgtaatgagatctgacaccctcttctggtg 120
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 276 agttcaaatcccagcaaccatatggtagctcgtaatgagatctgacgccctcttctggta 335
Query: 121 cgtctgatgacagatatagtgtacttaagtataataataaataaatcattctcactacaa 180
||||||| |||||| ||||||||||||||||||||||||| |||||
Sbjct: 336 cgtctgaagacaga---------------tataataataaataaatcattctcattacaa 380
Query: 181 accaaatgtccttgctggctgcaagcctctccccagtgtctctatgtaggaagcacacac 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 accaaatgtccttgctggctgcaagcctctccccagtgtctctatgtagggagcacacac 440
Query: 241 ttgttctcttgcagtgctggggactgggctcggagtggtaagtgactaatccactgttcc 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttctcttgcagtgctggggcctgggctcggagtggtaagtgactaatccactgttcc 500
Query: 301 tagctccatcttcatctctgacat 324
||||||||||||||||||||||||
Sbjct: 501 tagctccatcttcatctctgacat 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_k24.g1 MSMg01no352_k24.g1 CHROMAT_FILE:
MSMg01no352_k24.g1 PHD_FILE: MSMg01no352_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:19 2005
(323 letters)
>mm_chr18_35651316_35652038
Length = 723
Score = 625 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Minus
Query: 1 ctactgcatcagggaccagttcctaagcaaggtatttaaaggtaaccttggtcttacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctactgcatcagggaccagttcctaagcaaggtatttaaaggtaaccttggtcttacagt 366
Query: 61 cagtaggaagttgactttgattgtgtttgtgatgtaaagtctccatcctgagaccttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cagtaggaagttgactttgattgtgtttgtgatgtaaagtctccatcctgagaccttttt 306
Query: 121 gctcatggtgctttgtcctggaggacatcactgaagaagatgtttctcagttctcccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gctcatggtgctttgtcctggaggacatcactgaagaagatgtttctcagttctcccctc 246
Query: 181 ccttgtaaacatggttcctatacagagtgtagctattgatcatagttattttatttagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ccttgtaaacatggttcctatacagagtgtagctattgatcatagttattttatttagat 186
Query: 241 gagcctcatgtagcccaggatgacctataactcatttaatagttgaagatgaccttgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gagcctcatgtagcccaggatgacctataactcatttaatagttgaagatgaccttgagg 126
Query: 301 ttattgaaactgtttttttgatt 323
|||||||||||||||||||||||
Sbjct: 125 ttattgaaactgtttttttgatt 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
