Query= MSMg01no353_h21.b1 MSMg01no353_h21.b1 CHROMAT_FILE:
MSMg01no353_h21.b1 PHD_FILE: MSMg01no353_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:23 2005
(515 letters)
>mm_chr18_77135800_77136714
Length = 915
Score = 891 bits (461), Expect = 0.0
Identities = 500/533 (93%), Gaps = 32/533 (6%)
Strand = Plus / Plus
Query: 5 gaattctatttgtttacaagccagctgtgtaaagggtagtttagtttatttatctctaaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatttgtttagaagccagctgtgtaaagggtagtttagtttatttatctctaaa 264
Query: 65 gcatctactaaaacaagccccattagattagacattgttctgcttggctagtctgttgta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcatctactaaaacaagccccattagattagacattgttctgcttggctagtctgttgta 324
Query: 125 ttgcgagctcaggaaagcaacgtgaaagagttaagaaacctatccaacatgtggatactt 184
|||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 325 ttgcgagctcaggaaagcaacgtgaaagagttaagaaacctatccaac----------tt 374
Query: 185 acctgggcccttcctattttatttgactctctctctctctctctctctctctctctct-- 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acctgggcccttcctattttatttgactctctctctctctctctctctctctctctctct 434
Query: 243 --------------------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgc 282
||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgc 494
Query: 283 atcctgtatgtatgtgcaccatgtatgtgcaggagttcagagcggtcaatggctgtgagc 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atcctgtatgtatgtgcaccatgtatgtgcaggagttcagagcggtcaatggctgtgagc 554
Query: 343 cttcccagtgctggaaagggaaccctgtcctctggaagagcagtaagtgctcttaaccac 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cttcccagtgctggaaagggaaccctgtcctctggaagagcagtaagtgctcttaaccac 614
Query: 403 tgagcccatctctctagaccctgggcccatttttaacttcagaatcacttctggtattca 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tgagcccatctctctagaccctgggcccatttttaacttcagaatcacttctggtattca 674
Query: 463 tccttgtctgtaatgattgctctgaccagctcctgtctagacacctcatataa 515
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tccttgtctgtaatgattgctctgaccagctcctgtctagacacctcatataa 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_h21.g1 MSMg01no353_h21.g1 CHROMAT_FILE:
MSMg01no353_h21.g1 PHD_FILE: MSMg01no353_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:23 2005
(460 letters)
>mm_chr18_77188715_77189574
Length = 860
Score = 557 bits (288), Expect = e-163
Identities = 317/336 (94%), Gaps = 15/336 (4%)
Strand = Plus / Minus
Query: 1 acagtcctcctgcctcctaagagctggggttagagccctatgctacctcgttaatcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtcctcctgcctcctaagagctggggttagagccctatgctacctcgttaatcttta 262
Query: 61 ttctgagctgtatcacacaaggatacatttggtttagagatcattagtaacggggtctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgagctgtatcacacaaggatacatttggtttagagatcattagtaacggggt---- 206
Query: 121 aaatatagaggcttaagaagaggaatgagatttgatgtagttgggacttagggtttgttt 180
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 205 -----------cttaagaagaggaatgagatttgatgtagtcgggacttagggtttgttt 157
Query: 181 tgttttgagacaggatctcactatgtagccctatctgacctggaaccgctctgtagacca 240
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 156 tgttttgagacaggatctcactatgtagccctacctgacccggaaccgctctgtagacca 97
Query: 241 ggttttcctctagtattacaaccatccctgcttctgtatcccattgtctgcatcagaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ggttttcctctagtattacaaccatccctgcttctgtatcccattgtctgcatcagaggc 37
Query: 301 atctgccaccgtgcctggtgatttatacgttctttt 336
|||||||||| |||||||||||||||||||||||||
Sbjct: 36 atctgccaccatgcctggtgatttatacgttctttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
