NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGGCACTTACAGAGGGCATGCTTTATGCGAGCCTCAGAGCTT
GGGACCGTACAATGGCTTTTGCACCTCGGCTGCAATCCAGCCTTTGAGCC
CTAGGGGTCGCCAGTTAGCCTCGCCTTTCCCATGCTCCAACATTAAGAAC
AATAGCAGTTGTGAAATGCAATGAGGAAGAGCCAAGTATCAATGAGTTCC
TTCAGCCACCAGCCCCCTTCCCCCGGGGTTGTTCTCTCGATCATACCTTA
CCCCTTGAATCCTGGGCCCCTCAATATCAGAGCCCAGTGCTCAGCAGACA
TGGTGGCTCATGTCTGTAAGCCCAGAGACAAGAATCTGGACACAAATCTG
AGACCAACCTGTTCTACACAGTGAGTTCCAAGCCAGTAAGGGCTACTTGA
GACCCTGACTCAAACAACACAAAACGAATGTATACCAAAAGCTCCCACCA
AAGTTACAGACCTTGCCCCAGATCCTGTTGCCATCGTATGACCAACTGCC
CCTAAGTTCTCAACCTGTAGGTCCCAACCCCTTTACGGGTCACATGTCAG
AGGCTTATGTTATGATTTTTAACAGTAGCAGAATTATCATTATGAAGTTG
CAACACAATAATGTTATGGTTGGGGGGGGTCACCCCAACATGTAGGAACA
CCTTAATGGTTGCAGCATTAAGCAAAGTTTAGAACCACTGTAAGTATCC

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGATAAGGAGACTTGGTAAG
CGCAGTCTCTTTCCAGAGGTTGGGGGTCAGGTAGCTGTAGGTCTTGGAGA
TGACATCAAAGGTGGCCTTGGCAAAGTTGCCCAGGGTGGCAGTGCAGCCT
TGGCTCTTCTGGCAGGACATTGATCTGTGCTTTGGTCCTGTTGGTCGGTA
TTTGCTTCACATACATTGATGATCTATTATTAGATACGATCAACATAGTT
TTCTTGTAATATCTGCTGATGATCTTCAAAATAAAGATTTCCTTTTGGAA
GCAGAGGTAGCAGAATTGAGAGTTCAAAGCCAACTGTGGTTAGTGTCAAA
CAATTGTAATTTAAGCATTTGGGAGGTGGAGGAAGAATTGGGAGTTCAAA
GTTCAAATTCTCAGGTAGCTACAAAGCCAGTTTAGGCTACTTAAGACCCG
GTCACATGCCGGGCAAGGTGGCGCACACCTTTAATCCCAGCACTTGGGAG
GCAGAGGCAGGCGGATTTCTGAGCTCGAGGCTAGCCTGGTCTACAGAGTG
AGTTCTAGGACAGCCAGTGCTATACATACAAATCCTGTTCTCAAATAACC
TTAAACAACCATCAATAGCGCATTCTTAATTTTTTTTTGGGCCCAGGACT
AACCAGTCATTCTTCTTCCCTAATTGCTGTGTATCAAAATTTTGGTCTCC
CTTTTATAGC

Query= MSMg01no354_e03.b1 MSMg01no354_e03.b1 CHROMAT_FILE:
MSMg01no354_e03.b1 PHD_FILE: MSMg01no354_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:21 2005
         (578 letters)



>mm_chr18_74983076_74984053
          Length = 978

 Score =  930 bits (481), Expect = 0.0
 Identities = 543/575 (94%), Gaps = 18/575 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaggcacttacagagggcatgctttatgcgagcctcagagcttgggaccgtaca 63
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattcaggcacctagagagggcatgctttatgcgagcctcagagcttgggaccataca 263

                                                                       
Query: 64  atggcttttgcacctcggctgcaatccagcctttgagccctaggggtcgccagttagcct 123
           |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atggcttttgaacgtcggctgcaatccagcctttgagccctaggggtcgccagttagcct 323

                                                                       
Query: 124 cgcctttcccatgctccaacattaagaacaatagcagttgtgaaatgcaatgaggaagag 183
            ||||||||||||||||||||||||||||||||| ||| ||||||||             
Sbjct: 324 tgcctttcccatgctccaacattaagaacaatagaagtcgtgaaatg------------- 370

                                                                       
Query: 184 ccaagtatcaatgagttccttcagccaccagcccccttcccccggggttgttctctcgat 243
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 -----tatcaatgagttccttcagccaccagcccccttcccccggggttgttctctcgat 425

                                                                       
Query: 244 cataccttaccccttgaatcctgggcccctcaatatcagagcccagtgctcagcagacat 303
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 catcccttaccccttgaatcctgggcccctcaatatcagagcccagtgctcagcagacat 485

                                                                       
Query: 304 ggtggctcatgtctgtaagcccagagacaagaatctggacacaaatctgagaccaacctg 363
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 486 ggtggctcatgtctgtaagcccagagacaagaatctggacacaaaactgagactaacctg 545

                                                                       
Query: 364 ttctacacagtgagttccaagccagtaagggctacttgagaccctgactcaaacaacaca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 546 ttctacacagtgagttccaagccagtaagggctacttgagaccctgactcaaacaacgca 605

                                                                       
Query: 424 aaacgaatgtataccaaaagctcccaccaaagttacagaccttgccccagatcctgttgc 483
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 606 aaacgaatgtataccaaaagctcccaccaaagtcacagaccttgccccagatcctgttgc 665

                                                                       
Query: 484 catcgtatgaccaactgcccctaagttctcaacctgtaggtcccaacccctttacgggtc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 catcgtatgaccaactgcccctaagttctcaacctgtaggtcccaacccctttacgggtc 725

                                              
Query: 544 acatgtcagaggcttatgttatgatttttaacagt 578
           |||||||||||||||||||| ||||||||||||||
Sbjct: 726 acatgtcagaggcttatgttgtgatttttaacagt 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)