NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCAGCCTGCGCTACCAGTGAGTTCCAGGCCAGTCTGGGCCAGGC
TGGGAATTTGGCTCAAAATGCCACAGAGAATGGCTGTAGGACCATGCATT
CACCAACCGCACCGACTGGGCTCTGGGTTAAAAGAGTTAAGTAAGTAGTT
TAAAAAGGAGAACATGACGCTGGGAAGGAGAGACAATGGAAGGTCCAGGC
GGTGGTGGACGTGACCAGGGTATGTTATATACATGTATGGAATCTTCAAA
GTTTAAAGACTGAAACACTCAGAAAGGAAAGGATTCCCAGCTGAATAGAG
CCGACAGCAGGTGGTTGGTGACTATGTGGTCCGCAGCTTCATCACCTGTC
CTGTGAGCAGGGAGAGGCCTGGGAAGTCCTGGCTGGAACTCAGGTTCTAT
GGCTTTGTAGTAACTCACAGGGATGCCTTAGGACCACTGGGGGTAAATGG
TTTTCACGGGAAACTGTAATAATTTTATTCCCAAAAGAAATGGATTTGTC
AGAAAATAAGTAAGCTTTAATTACTGTTACTATTATAAATCTTCCGGAGA
TTTATAAGTCAACCAACTTTTCTTCCAAAAAGTTTCAAAGGGGATTTTTT
CCTTACTATGTGGGAGGAAGTGGATGGGGCGGATGTGGGAAAGCGCGACA
CCATTCTCCCCTCTCCTCTTTTCTTTCCTATCTCCTTTTCCCCG

NTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCTTCCCAGGTCCCCAGTTT
CCATTTTGAAAAGGATTTCTTTTCATTGTCTCTTCCGTTTGCTTTCACAA
CACACATGTCCCTTCACACCTCAGGGCTGTTTACCTCTACCACCCTGTCC
CTGCTAGAGAGAAGGGGAGCACTCTACTCTCCCACCCTGTCCCTGCTGGA
GAGAAGGGGAGCACTCCACCCCACCATCCTGTCCCTGCTAGAGAGAAGGG
GAGCACTCTACTCTCCCACCCTGTCCCTGCTGGAGAGAAGGGGAGCACTT
CACCCCACCACCCTGTCCCTGCTAGAGAGAAGGGGAGCACTCCACCCTAC
CACCCTGCCCCTGCTAGAGGGAAGGGGAGCACTCCACCCCACCATCCTGT
CTCTGCTAGAGGGAAGGGGAGCACTCCATCCTGTCCCTGCTGGAGAGAAG
GGGAGCACTCCACCCCACCACCCATGAAGTCTGCAGGGTATGCTTTCTGA
GTTCCCTTTGCAGACCAAAGCTTTGGCCATGGGCTCCAATACCCAAGTCC
TGGGAAGTATTAGGAAGAAAACAGTCCAGCAAGTAAGAATGGATGTGCTG
CCCAGTGAAGGGACTCCCTAAGAGCTTGCCCACTGGTGGGAGAGAACAAG
TGCCCCCCTCTCCCCACAATTGAAAATTTGTGGGACTCTCCTAATTAGAA
AAACCTN

Query= MSMg01no355_h18.b1 MSMg01no355_h18.b1 CHROMAT_FILE:
MSMg01no355_h18.b1 PHD_FILE: MSMg01no355_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:57 2005
         (438 letters)



>mm_chr18_24458923_24459760
          Length = 838

 Score =  775 bits (401), Expect = 0.0
 Identities = 428/437 (97%)
 Strand = Plus / Plus

                                                                       
Query: 2   agtgagttccaggccagtctgggccaggctgggaatttggctcaaaatgccacagagaat 61
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agtgagttccagggcagtctgggccaggctgggaatttggctcaaaatgccacagagaat 261

                                                                       
Query: 62  ggctgtaggaccatgcattcaccaaccgcaccgactgggctctgggttaaaagagttaag 121
           |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 262 ggctgtaggatcatgcattcaccaactgcaccgactgggctctgggttaaaagagataag 321

                                                                       
Query: 122 taagtagtttaaaaaggagaacatgacgctgggaaggagagacaatggaaggtccaggcg 181
           ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 322 taagtagtttagaaaggagaacatgacgctgggaaggagaggcaatggaaggtccaggtg 381

                                                                       
Query: 182 gtggtggacgtgaccagggtatgttatatacatgtatggaatcttcaaagtttaaagact 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtggtggacgtgaccagggtatgttatatacatgtatggaatcttcaaagtttaaagact 441

                                                                       
Query: 242 gaaacactcagaaaggaaaggattcccagctgaatagagccgacagcaggtggttggtga 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaaacactcagaaaggaaaggattcccagctgaatagagccgacagcaggtggttggtga 501

                                                                       
Query: 302 ctatgtggtccgcagcttcatcacctgtcctgtgagcagggagaggcctgggaagtcctg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctatgtggtccgcagcttcatcacctgtcctgtgagcagggagaggcctgggaagtcctg 561

                                                                       
Query: 362 gctggaactcaggttctatggctttgtagtaactcacagggatgccttaggaccactggg 421
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gctggagctcaggttctatggctttgtagtaactcacagggatgccttaggaccactggg 621

                            
Query: 422 ggtaaatggttttcacg 438
           |||||||| ||||||||
Sbjct: 622 ggtaaatgcttttcacg 638


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space:   355641
Effective search space used:   355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)