Query= MSMg01no355_j07.b1 MSMg01no355_j07.b1 CHROMAT_FILE:
MSMg01no355_j07.b1 PHD_FILE: MSMg01no355_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:04 2005
(551 letters)
>mm_chr18_52868637_52869587
Length = 951
Score = 992 bits (513), Expect = 0.0
Identities = 542/553 (98%), Gaps = 4/553 (0%)
Strand = Plus / Plus
Query: 1 catgccttataacagatgcttagggagcttttaaaggtggtagccgttgtcatgaaaaca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 catgccttataacagatgcttagggagcttttaagggtggtagccgttgtcatgaaaaca 260
Query: 61 tatacgattatcagtaagtatgatgaggagagttaagcacgtagtgaaaatcagaacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatacgattatcagtaagtatgatgaggagagttaagcacgtagtgaaaatcagaacacc 320
Query: 121 ctaatgcacttattacttcccacttccattccatgtctccatccacaacactcgtgtgga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 ctaatgcacttattacttcccacttccattccatgtctccatccacaacacttgtgtgga 380
Query: 181 gaaggcttatgtactgtaagcagtgattagagttgaggctcttgagaggcatttgaatca 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gaaggcttatgtactgtaagcagtgattagagctgaggctcttgagaggcatttgaatca 440
Query: 241 tgcgagctctg--ttcctaacagtttactaatctattaatggattagaagtcccgaacag 298
||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tgcgagctctgtctt--taacaatttactaatctattaatggattcgaagtcccgaacag 498
Query: 299 atgggtagcatatgctacaactgtggaaggtgaggcctaatggaagggtgtgggttgccc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atgggtagcatatgctacaactgtggaaggtgaggcctaatggaagggtgtgggttgccc 558
Query: 359 ttgaaggggtgtgcatatggatcctggcaagatttttctactcttttggctgtttgtaag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttgaaggggtgtgcatatggatcctggcaagatttttctactcttttggctgtttgtaag 618
Query: 419 gtgagtggtgttactgccattatattcaaccttatctaagggtcatatctaccttatcta 478
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 619 gtgagtggtgttactgccattatcttcaaccttatctaagggccatatctaccttatcta 678
Query: 479 acttatttggctaaaataagtcaaattgtaccactggtcacaaataatccttttctcctt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acttatttggctaaaataagtcaaattgtaccactggtcacaaataatccttttctcctt 738
Query: 539 tggcattatttct 551
|||||||||||||
Sbjct: 739 tggcattatttct 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_j07.g1 MSMg01no355_j07.g1 CHROMAT_FILE:
MSMg01no355_j07.g1 PHD_FILE: MSMg01no355_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:04 2005
(435 letters)
>mm_chr18_53079677_53080507
Length = 831
Score = 779 bits (403), Expect = 0.0
Identities = 426/435 (97%), Gaps = 4/435 (0%)
Strand = Plus / Minus
Query: 1 acagatacatctcaaccatcaagaaaggatgagagaatgaacaaaggaaggcaatgggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 acagatacatctcaaccatcaagaaaggatgagagaatgaacaaaggaaggcaatgggat 572
Query: 61 tggcgagatgggtattctagaaaaacctaggctaaggattgctgcttagattgagtgcaa 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 571 tggcgagatgggtattctagaaaaaactaggctaaggattgctgcttagattgagtgcaa 512
Query: 121 gcttcacttttaacctttttctggcaggcaagaggaaaaggaaaacacaagtcatataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gcttcacttttaacctttttctggcaggcaagaggaaaaggaaaacacaagtcatataag 452
Query: 181 gttcttattagctaataaaagcaccaggccaggttttctatggaggcagatttcccctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gttcttattagctaataaaagcaccaggccaggttttctatggaggcagatttcccctct 392
Query: 241 agtactatttctaagaggaatttatttttatggccccttatggagctattggcttttaaa 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agtactaactctaagaggaatttatttttatggccccttatggagctattggcttttaaa 332
Query: 301 aacatgtgatggtttcaagaagttttataaaaaaatatggaaacttttttctacatggct 360
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 331 aacatatgatggtttcaagaagttttataaaaaaa-atggaaacttttttctacatggct 273
Query: 361 atttcttatattgatttttgataaatgccacagtgtaggggtgatttttttttttttgga 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 272 atttcttatattgatttttgataaatgccacagtgtaggggtga---ttttttttttgga 216
Query: 421 gacccaggatataat 435
||| |||||||||||
Sbjct: 215 gactcaggatataat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 831
Length adjustment: 9
Effective length of query: 426
Effective length of database: 822
Effective search space: 350172
Effective search space used: 350172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
