Query= MSMg01no358_a23.b1 MSMg01no358_a23.b1 CHROMAT_FILE:
MSMg01no358_a23.b1 PHD_FILE: MSMg01no358_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:14 2005
(426 letters)
>mm_chr18_51399476_51400301
Length = 826
Score = 793 bits (410), Expect = 0.0
Identities = 419/422 (99%)
Strand = Plus / Minus
Query: 3 ggaattctcttgatcaagaatgtttctctcgttcttcattacactacaatggtgagtgat 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggaattctcttgatcaaaaatgtttctctcgttcttcattacactacaatggtgagtgat 565
Query: 63 gttcaagctaagaaagaactggcttcccaggttaattgtaacaatgaaatgggctataca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttcaagctaagaaagaactggcttcccaggttaattgtaacaatgaaatgggctataca 505
Query: 123 ggaatggcctgcacaggtttaatgctctgccaagggtttttgtttctgtgattgagttga 182
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggaacggcctgtacaggtttaatgctctgccaagggtttttgtttctgtgattgagttga 445
Query: 183 aagagcaggaaaggacaacacatgtccaaatctgtgtcaaccgcgtttctcaaaacactg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagagcaggaaaggacaacacatgtccaaatctgtgtcaaccgcgtttctcaaaacactg 385
Query: 243 agtataaaattctgaactcagccctcaaggctggactatgaattttcttggagggcagca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtataaaattctgaactcagccctcaaggctggactatgaattttcttggagggcagca 325
Query: 303 gtgccacaggctgcagtagttggcaagcctaagatcctccctcacaacaaagtacaagag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtgccacaggctgcagtagttggcaagcctaagatcctccctcacaacaaagtacaagag 265
Query: 363 ccaaaatgtaagcacacctccagaatctctcagctttacaattaccaccgttttcttttt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccaaaatgtaagcacacctccagaatctctcagctttacaattaccaccgttttcttttt 205
Query: 423 cc 424
||
Sbjct: 204 cc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_a23.g1 MSMg01no358_a23.g1 CHROMAT_FILE:
MSMg01no358_a23.g1 PHD_FILE: MSMg01no358_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:14 2005
(518 letters)
>mm_chr18_51297585_51298502
Length = 918
Score = 926 bits (479), Expect = 0.0
Identities = 509/519 (98%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 1 acacatacaacacatgctgtacacttaaaaattatagttttgtaactagtttttcttatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acacatacaacacatgctgtacacttaaaaattatagttttgtaactagtttttcttatg 259
Query: 61 tgtttggtcttcagtccaaagacaacagaaaagtagtattcattgcaacagacaatttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtttggtcttcagtccaaagacaacagaaaagtagtattcattgcaacagacaatttta 319
Query: 121 tgaaaaaatgtacatttctctgtattaattaattagacttaataagttgatggtgcttca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 tgaaaaaatgtacatttctctgtattaattaattagacttaataagttgatgctgcttca 379
Query: 181 ttttaaatttaagctttcagtctgagataattgtagattcacatgcatgtgtataaaggg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 380 ttttaaatttaagctttcagtctgagataattgtagattcacatgcatgtgtgtaaagag 439
Query: 241 aattgctgaagacctcttgaccttctccagcgctctccatggaactatctttcaaatctg 300
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 440 aattgctggagacctcttgaccttctccagtgctctccatggaactatctttcaaatctg 499
Query: 301 tagtaaa-tatactatctgggatattgacatcaatggagttgggattcaaaatttccaat 359
||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tagcaaaatatactaactgggatattgacatcaatggagttgggattcaaaatttccaat 559
Query: 360 gaataaaaggattttaccagggtcttttacaacgttcccaacatcactaatatgtccatt 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 560 gaataaaaggattttaccagggtcttttacaacgttcccaacatcactaacatgtccatt 619
Query: 420 catgccctaaccactcacaacctttttctgtaaattttcttttgtgagatagttatagtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catgccctaaccactcacaacctttttctgtaaattttcttttgtgagatagttatagtt 679
Query: 480 gaaatgtaaatgaagaaaatatctaatgaaaatgactaa 518
||||||||||||||||||||||||||| |||||||||||
Sbjct: 680 gaaatgtaaatgaagaaaatatctaataaaaatgactaa 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
