Query= MSMg01no358_o16.b1 MSMg01no358_o16.b1 CHROMAT_FILE:
MSMg01no358_o16.b1 PHD_FILE: MSMg01no358_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:18 2005
(519 letters)
>mm_chr18_33480761_33481679
Length = 919
Score = 996 bits (515), Expect = 0.0
Identities = 518/519 (99%)
Strand = Plus / Plus
Query: 1 gtaccatgtttggttgcatgctatcacatttcccaccataacataaaggactaaatctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaccatgtttggttgcatgctatcacatttcccaccataacataaaggactaaatctct 260
Query: 61 ggactttaagccagccccagttaaatattgtcctttatacaagttgctatggtcatagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggactttaagccagccccagttaaatattgtcctttatacaagttgctatggtcatagca 320
Query: 121 tgcaataaaaccctaagtaggacagaaagggaataacaagaaggcagcatatagattagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaataaaaccctaagtaggacagaaagggaataacaagaaggcagcatatagattagg 380
Query: 181 gagtactgcaggtgcgtgaggagtaacaatgtctgaacatgccacaacaaaatccccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtactgcaggtgcgtgaggagtaacaatgtctgaacatgccacaacaaaatccccaac 440
Query: 241 ttcttatgctaactttgaaaattaatttaaaagggaaatgaaaacattttaaaaccacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcttatgctaactttgaaaattaatttaaaagggaaatgaaaacattttaaaaccacaa 500
Query: 301 gaaagacacacacatttccagaaatgattagagttcagaggcattaagaactgcatgtgg 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 gaaagacacacacatttccagaaatgattagagttcagaggcattaagaattgcatgtgg 560
Query: 361 gtgaatgggacttccacacatttgcttcagactgctatagttttggttagtttgtgatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaatgggacttccacacatttgcttcagactgctatagttttggttagtttgtgatga 620
Query: 421 gccctccatttgagcgtcacctgcatagtaaaagaatggactgtggagcatcatatattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccctccatttgagcgtcacctgcatagtaaaagaatggactgtggagcatcatatattg 680
Query: 481 cacacacataatatacaattaaagatgttggaactttgg 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacacacataatatacaattaaagatgttggaactttgg 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_o16.g1 MSMg01no358_o16.g1 CHROMAT_FILE:
MSMg01no358_o16.g1 PHD_FILE: MSMg01no358_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:18 2005
(467 letters)
>mm_chr18_33645517_33646383
Length = 867
Score = 582 bits (301), Expect = e-170
Identities = 334/353 (94%), Gaps = 16/353 (4%)
Strand = Plus / Minus
Query: 1 agataaccagttttagcagcaaatgcctttacctgctgagt--cttatagctggttcata 58
|||||||||| |||||||||||||||||||||||||||||| || | | |||||||||
Sbjct: 351 agataaccagctttagcagcaaatgcctttacctgctgagtcact--tgggtggttcata 294
Query: 59 tttttaaatttattctttgacaatttcaaacatgtaaactattttttagctttcatatca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tttttaaatttattctttgacaatttcaaacatgtaaactattttttagctttcatatca 234
Query: 119 ataaaactatttaatctaaaaagttcaataaactattttgatgatattcctaccctatta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ataaaactatttaatctaaaaagttcaataaactattttgatgatattcctaccctatta 174
Query: 179 cctcctcccactaccctgatacctcttctggatctctttgttcttttttacttgcatggg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cctcctcccactaccctgatacctcttctggatctctttgttcttttttacttgcatggg 114
Query: 239 gtgtttgtttg--------cttgcttgcttgctt----tttgtttttcatagtggacact 286
||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 113 gtgtttgtttgtttgtttgcttgcttgcttgcttgttttttgtttttcatagtggacact 54
Query: 287 gagtttaattaggattgcttgcatccatgaggatgttatttactggaacacgg 339
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 gagtttaattaggattgcttgcatccatgaggatgttatttactggaacacgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
