Query= MSMg01no359_c16.b1 MSMg01no359_c16.b1 CHROMAT_FILE:
MSMg01no359_c16.b1 PHD_FILE: MSMg01no359_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:36 2005
(475 letters)
>mm_chr18_77554531_77555411
Length = 881
Score = 872 bits (451), Expect = 0.0
Identities = 468/477 (98%), Gaps = 6/477 (1%)
Strand = Plus / Plus
Query: 5 gaattctagggccagtggcgatggataacatggccacctgtgcacccagctttcctgacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagggccagtggcgatggataacatggccacctgtgcacccagctttcctgacc 264
Query: 65 tgcacagggtggagcagagtcagcttcgtctggctgggaaagaacagtccacccttccag 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcacagggtagagcagagtcagcttcgtctggctgggaaagaacagtccacccttccag 324
Query: 125 ggagccttccacgacacataccccttctctccctgcgaattttcatcgcctcctctgcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagccttccacgacacataccccttctctccctgcgaattttcatcgcctcctctgcac 384
Query: 185 agcctgtgatttctcccttccagcgcctcagctggtgtctgctacaggctgtgaaatcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcctgtgatttctcccttccagcgcctcagctggtgtctgctacaggctgtgaaatcag 444
Query: 245 ccaggcccccagaggctgagtcgcaggtccaggtccagg------actggggatacttgg 298
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 445 ccaggcccccagaggctgagtcgcaggtccaggtccaggtccaggactggggatacttgg 504
Query: 299 gtggaagagaaagacggggttactcgtgactatttctcaaaaccaaccaaacaaaaaacc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtggaagagaaagacggggttactcgtgactatttctcaaaaccaaccaaacaaaaaacc 564
Query: 359 caaaacaaaaacaacaacacacctgaccacgtggacggttccagcctaggcttagttagt 418
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 caaaacaaaaacaacaacacacctgaccacatggacggttccagcctaggcttagttagt 624
Query: 419 gtcactgtgagaaccctttccagggccgcaaggctcagagacaggcatgcactcaac 475
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtcagtgtgagaaccctttccagggccgcaaggctcagagacaggcatgcactcaac 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 881
Length adjustment: 10
Effective length of query: 465
Effective length of database: 871
Effective search space: 405015
Effective search space used: 405015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_c16.g1 MSMg01no359_c16.g1 CHROMAT_FILE:
MSMg01no359_c16.g1 PHD_FILE: MSMg01no359_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:36 2005
(321 letters)
>mm_chr18_77713457_77714177
Length = 721
Score = 598 bits (309), Expect = e-175
Identities = 318/321 (99%)
Strand = Plus / Minus
Query: 1 actcagtggagctgggcattatcctgtgccaagactggagctcagtgttcatggtcctgc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 actcagtggagctgggcactatcctgtgccaagactggagctcagtgttcatggtcctgc 462
Query: 61 cagaaagaagggagacaggatgtgacgtgtttcctaagttcagtagtactataaaccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cagaaagaagggagacaggatgtgacgtgtttcctaagttcagtagtactataaaccagg 402
Query: 121 ggactctagagtacagcttgggaggagaattcagagatgctagtgtggtcagggaaggct 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 401 ggactctagagtacagcttgggaggcgaattcagagatgctagtgtggtcagggaaggct 342
Query: 181 tcctggtggagggaagaatccacagagaaatggtagagcgtataagaaaggcagtgcaga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 341 tcctggtggagggaagaatccacagagaaatggtagagcgtataagaaaggcggtgcaga 282
Query: 241 gagcgtgactcggactgaggttagaggtaagcttaggactgtggagaggagcagaggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gagcgtgactcggactgaggttagaggtaagcttaggactgtggagaggagcagaggagg 222
Query: 301 aagtggaggacgttgtagtgt 321
|||||||||||||||||||||
Sbjct: 221 aagtggaggacgttgtagtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
