Query= MSMg01no359_g04.b1 MSMg01no359_g04.b1 CHROMAT_FILE:
MSMg01no359_g04.b1 PHD_FILE: MSMg01no359_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:52 2005
(475 letters)
>mm_chr18_44165200_44166075
Length = 876
Score = 845 bits (437), Expect = 0.0
Identities = 464/473 (98%), Gaps = 3/473 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtggagtcctgtgcttggcaaagttttcatcacacttagaaaaacatatcctt 64
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 676 gaattctgtggagtcctgtgcttggcaaagttttcatcacgcttaaaaaaacatatcctt 617
Query: 65 aactaccagctaattggcatttcctaaatgtttgcttagggccttgagtttttttgttaa 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aactaccatctaattggcatttcctaaatgtttgcttagggccttgagtttttttgttaa 557
Query: 125 aatttctcccatgtataagaggactcaagtgctgtcattttttaacaagtatgatcttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatttctcccatgtataagaggactcaagtgctgtcattttttaacaagtatgatcttcc 497
Query: 185 tcctatattgtttgcttttcagaaacaaaacactgacatcacctatgactgtaattcttt 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 496 tcctatattgtttgcttttcagaaacaaaacactgacatcacctgtgactgtaattcttt 437
Query: 245 cttccaggttgcatcgctgttgcccattaatatctccctatcatcagctgccttcacctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cttccaggttgcatcgctgttgcccattaatatctccctatcatcagctgccttcacctt 377
Query: 305 gaccacttgtgtctttttccttattctagctgctcc-tcctgccccccactggataatgg 363
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 376 gaccacttgtgtctttttccttattctagctgc-ccatcctgccccccactggataatgg 318
Query: 364 ctgactatcaatctcctcacaccagtagcattcattatgttagacttttccgtctccttt 423
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 317 ctgactatcaatctcctcacaccagtagcattcattatgttagacttttcagtctccttt 258
Query: 424 ttcttctattgattactgctgc-tttactttcccaaatgaatcatatttctac 475
|||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 257 ttcttctattgattactgctgcttttactttcctaaatgaatcatatttctac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 876
Length adjustment: 10
Effective length of query: 465
Effective length of database: 866
Effective search space: 402690
Effective search space used: 402690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_g04.g1 MSMg01no359_g04.g1 CHROMAT_FILE:
MSMg01no359_g04.g1 PHD_FILE: MSMg01no359_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:52 2005
(242 letters)
>mm_chr18_43970864_43971505
Length = 642
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Plus
Query: 1 ttcattgttcaatagctttttccagcagtgtgagagaggctgaagaaaattcaaagaggg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ttcattgttcaatagctttttccagccgtgtgagagaggctgaagaaaattcaaagaggg 260
Query: 61 agtcaactgtactaaggtgtgaatggtagaccagaggtagaccaagatttacaggaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcaactgtactaaggtgtgaatggtagaccagaggtagaccaagatttacaggaaagt 320
Query: 121 ggatgacagttccaaggatctcaggatattgtcataggtggtatgtagactggagaatat 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatgacagttgcaaggatctcaggatattgtcataggtggtatgtagactggagaatat 380
Query: 181 tccgggttccacttgttcaaaattctgtaggctaattcatatacctgggatttatgctta 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tccgggttccacttgttcaaaattctgtaggctaattcatataactgggatttatgctta 440
Query: 241 gg 242
||
Sbjct: 441 gg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
